Move delete button from table to edit modal

- Delete button now appears in the edit modal footer (left side)
- Cleaner table layout with just Test and Edit buttons
- Delete button only shows when editing existing sources

CHANGELOG.md

@@ -6,21 +6,6 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
 ## [Unreleased]
-### Added
-- Added transparent PyPI proxy implementing PEP 503 Simple API (#108)
-  - `GET /pypi/simple/` - package index (proxied from upstream)
-  - `GET /pypi/simple/{package}/` - version list with rewritten download links
-  - `GET /pypi/simple/{package}/{filename}` - download with automatic caching
-  - Allows `pip install --index-url https://orchard.../pypi/simple/ <package>`
-  - Artifacts cached on first access through configured upstream sources
-- Added `POST /api/v1/cache/resolve` endpoint to cache packages by coordinates instead of URL (#108)
-
-### Changed
-- Upstream sources table text is now centered under column headers (#108)
-- ENV badge now appears inline with source name instead of separate column (#108)
-- Test and Edit buttons now have more prominent button styling (#108)
-- Reduced footer padding for cleaner layout (#108)
-
 ### Fixed
 - Fixed purge_seed_data crash when deleting access permissions - was comparing UUID to VARCHAR column (#107)
 

backend/app/main.py

@@ -11,7 +11,6 @@ from slowapi.errors import RateLimitExceeded
 from .config import get_settings
 from .database import init_db, SessionLocal
 from .routes import router
-from .pypi_proxy import router as pypi_router
 from .seed import seed_database
 from .auth import create_default_admin
 from .rate_limit import limiter
@@ -66,7 +65,6 @@ app.add_exception_handler(RateLimitExceeded, _rate_limit_exceeded_handler)
 
 # Include API routes
 app.include_router(router)
-app.include_router(pypi_router)
 
 # Serve static files (React build) if the directory exists
 static_dir = os.path.join(os.path.dirname(__file__), "..", "..", "frontend", "dist")

backend/app/pypi_proxy.py

@@ -1,780 +0,0 @@
-"""
-Transparent PyPI proxy implementing PEP 503 (Simple API).
-
-Provides endpoints that allow pip to use Orchard as a PyPI index URL.
-Artifacts are cached on first access through configured upstream sources.
-"""
-
-import hashlib
-import logging
-import re
-import tarfile
-import zipfile
-from io import BytesIO
-from typing import Optional, List, Tuple
-from urllib.parse import urljoin, urlparse, quote, unquote
-
-import httpx
-from fastapi import APIRouter, Depends, HTTPException, Request, Response
-from fastapi.responses import StreamingResponse, HTMLResponse
-from sqlalchemy.orm import Session
-
-from .database import get_db
-from .models import UpstreamSource, CachedUrl, Artifact, Project, Package, Tag, PackageVersion, ArtifactDependency
-from .storage import S3Storage, get_storage
-from .config import get_env_upstream_sources
-
-logger = logging.getLogger(__name__)
-
-router = APIRouter(prefix="/pypi", tags=["pypi-proxy"])
-
-
-def _parse_requires_dist(requires_dist: str) -> Tuple[str, Optional[str]]:
-    """Parse a Requires-Dist line into (package_name, version_constraint).
-
-    Examples:
-        "requests (>=2.25.0)" -> ("requests", ">=2.25.0")
-        "typing-extensions; python_version < '3.8'" -> ("typing-extensions", None)
-        "numpy>=1.21.0" -> ("numpy", ">=1.21.0")
-        "certifi" -> ("certifi", None)
-
-    Returns:
-        Tuple of (normalized_package_name, version_constraint or None)
-    """
-    # Remove any environment markers (after semicolon)
-    if ';' in requires_dist:
-        requires_dist = requires_dist.split(';')[0].strip()
-
-    # Match patterns like "package (>=1.0)" or "package>=1.0" or "package"
-    # Pattern breakdown: package name, optional whitespace, optional version in parens or directly
-    match = re.match(
-        r'^([a-zA-Z0-9][-a-zA-Z0-9._]*)\s*(?:\(([^)]+)\)|([<>=!~][^\s;]+))?',
-        requires_dist.strip()
-    )
-
-    if not match:
-        return None, None
-
-    package_name = match.group(1)
-    # Version can be in parentheses (group 2) or directly after name (group 3)
-    version_constraint = match.group(2) or match.group(3)
-
-    # Normalize package name (PEP 503)
-    normalized_name = re.sub(r'[-_.]+', '-', package_name).lower()
-
-    # Clean up version constraint
-    if version_constraint:
-        version_constraint = version_constraint.strip()
-
-    return normalized_name, version_constraint
-
-
-def _extract_requires_from_metadata(metadata_content: str) -> List[Tuple[str, Optional[str]]]:
-    """Extract all Requires-Dist entries from METADATA/PKG-INFO content.
-
-    Args:
-        metadata_content: The content of a METADATA or PKG-INFO file
-
-    Returns:
-        List of (package_name, version_constraint) tuples
-    """
-    dependencies = []
-
-    for line in metadata_content.split('\n'):
-        if line.startswith('Requires-Dist:'):
-            # Extract the value after "Requires-Dist:"
-            value = line[len('Requires-Dist:'):].strip()
-            pkg_name, version = _parse_requires_dist(value)
-            if pkg_name:
-                dependencies.append((pkg_name, version))
-
-    return dependencies
-
-
-def _extract_metadata_from_wheel(content: bytes) -> Optional[str]:
-    """Extract METADATA file content from a wheel (zip) file.
-
-    Wheel files have structure: {package}-{version}.dist-info/METADATA
-
-    Args:
-        content: The wheel file content as bytes
-
-    Returns:
-        METADATA file content as string, or None if not found
-    """
-    try:
-        with zipfile.ZipFile(BytesIO(content)) as zf:
-            # Find the .dist-info directory
-            for name in zf.namelist():
-                if name.endswith('.dist-info/METADATA'):
-                    return zf.read(name).decode('utf-8', errors='replace')
-    except Exception as e:
-        logger.warning(f"Failed to extract metadata from wheel: {e}")
-    return None
-
-
-def _extract_metadata_from_sdist(content: bytes, filename: str) -> Optional[str]:
-    """Extract PKG-INFO file content from a source distribution (.tar.gz).
-
-    Source distributions have structure: {package}-{version}/PKG-INFO
-
-    Args:
-        content: The tarball content as bytes
-        filename: The original filename (used to determine package name)
-
-    Returns:
-        PKG-INFO file content as string, or None if not found
-    """
-    try:
-        with tarfile.open(fileobj=BytesIO(content), mode='r:gz') as tf:
-            # Find PKG-INFO in the root directory of the archive
-            for member in tf.getmembers():
-                if member.name.endswith('/PKG-INFO') and member.name.count('/') == 1:
-                    f = tf.extractfile(member)
-                    if f:
-                        return f.read().decode('utf-8', errors='replace')
-    except Exception as e:
-        logger.warning(f"Failed to extract metadata from sdist {filename}: {e}")
-    return None
-
-
-def _extract_dependencies(content: bytes, filename: str) -> List[Tuple[str, Optional[str]]]:
-    """Extract dependencies from a PyPI package file.
-
-    Supports wheel (.whl) and source distribution (.tar.gz) formats.
-
-    Args:
-        content: The package file content as bytes
-        filename: The original filename
-
-    Returns:
-        List of (package_name, version_constraint) tuples
-    """
-    metadata = None
-
-    if filename.endswith('.whl'):
-        metadata = _extract_metadata_from_wheel(content)
-    elif filename.endswith('.tar.gz'):
-        metadata = _extract_metadata_from_sdist(content, filename)
-
-    if metadata:
-        return _extract_requires_from_metadata(metadata)
-
-    return []
-
-# Timeout configuration for proxy requests
-PROXY_CONNECT_TIMEOUT = 30.0
-PROXY_READ_TIMEOUT = 60.0
-
-
-def _extract_pypi_version(filename: str) -> Optional[str]:
-    """Extract version from PyPI filename.
-
-    Handles formats like:
-    - cowsay-6.1-py3-none-any.whl
-    - cowsay-1.0.tar.gz
-    - some_package-1.2.3.post1-cp39-cp39-linux_x86_64.whl
-    """
-    # Remove extension
-    if filename.endswith('.whl'):
-        # Wheel: name-version-pytag-abitag-platform.whl
-        parts = filename[:-4].split('-')
-        if len(parts) >= 2:
-            return parts[1]
-    elif filename.endswith('.tar.gz'):
-        # Source: name-version.tar.gz
-        base = filename[:-7]
-        # Find the last hyphen that precedes a version-like string
-        match = re.match(r'^(.+)-(\d+.*)$', base)
-        if match:
-            return match.group(2)
-    elif filename.endswith('.zip'):
-        # Egg/zip: name-version.zip
-        base = filename[:-4]
-        match = re.match(r'^(.+)-(\d+.*)$', base)
-        if match:
-            return match.group(2)
-    return None
-
-
-def _get_pypi_upstream_sources(db: Session) -> list[UpstreamSource]:
-    """Get all enabled upstream sources configured for PyPI."""
-    # Get database sources
-    db_sources = (
-        db.query(UpstreamSource)
-        .filter(
-            UpstreamSource.source_type == "pypi",
-            UpstreamSource.enabled == True,
-        )
-        .order_by(UpstreamSource.priority)
-        .all()
-    )
-
-    # Get env sources
-    env_sources = [
-        s for s in get_env_upstream_sources()
-        if s.source_type == "pypi" and s.enabled
-    ]
-
-    # Combine and sort by priority
-    all_sources = list(db_sources) + list(env_sources)
-    return sorted(all_sources, key=lambda s: s.priority)
-
-
-def _build_auth_headers(source) -> dict:
-    """Build authentication headers for an upstream source."""
-    headers = {}
-
-    if hasattr(source, 'auth_type'):
-        if source.auth_type == "bearer":
-            password = source.get_password() if hasattr(source, 'get_password') else getattr(source, 'password', None)
-            if password:
-                headers["Authorization"] = f"Bearer {password}"
-        elif source.auth_type == "api_key":
-            custom_headers = source.get_headers() if hasattr(source, 'get_headers') else {}
-            if custom_headers:
-                headers.update(custom_headers)
-
-    return headers
-
-
-def _get_basic_auth(source) -> Optional[tuple[str, str]]:
-    """Get basic auth credentials if applicable."""
-    if hasattr(source, 'auth_type') and source.auth_type == "basic":
-        username = getattr(source, 'username', None)
-        if username:
-            password = source.get_password() if hasattr(source, 'get_password') else getattr(source, 'password', '')
-            return (username, password or '')
-    return None
-
-
-def _get_base_url(request: Request) -> str:
-    """
-    Get the external base URL, respecting X-Forwarded-Proto header.
-
-    When behind a reverse proxy that terminates SSL, the request.base_url
-    will show http:// even though the external URL is https://. This function
-    checks the X-Forwarded-Proto header to determine the correct scheme.
-    """
-    base_url = str(request.base_url).rstrip('/')
-
-    # Check for X-Forwarded-Proto header (set by reverse proxies)
-    forwarded_proto = request.headers.get('x-forwarded-proto')
-    if forwarded_proto:
-        # Replace the scheme with the forwarded protocol
-        parsed = urlparse(base_url)
-        base_url = f"{forwarded_proto}://{parsed.netloc}{parsed.path}"
-
-    return base_url
-
-
-def _rewrite_package_links(html: str, base_url: str, package_name: str, upstream_base_url: str) -> str:
-    """
-    Rewrite download links in a PyPI simple page to go through our proxy.
-
-    Args:
-        html: The HTML content from upstream
-        base_url: Our server's base URL
-        package_name: The package name for the URL path
-        upstream_base_url: The upstream URL used to fetch this page (for resolving relative URLs)
-
-    Returns:
-        HTML with rewritten download links
-    """
-    # Pattern to match href attributes in anchor tags
-    # PyPI simple pages have links like:
-    # <a href="https://files.pythonhosted.org/packages/.../file.tar.gz#sha256=...">file.tar.gz</a>
-    # Or relative URLs from Artifactory like:
-    # <a href="../../packages/packages/62/35/.../requests-0.10.0.tar.gz#sha256=...">
-
-    def replace_href(match):
-        original_url = match.group(1)
-
-        # Resolve relative URLs to absolute using the upstream base URL
-        if not original_url.startswith(('http://', 'https://')):
-            # Split off fragment before resolving
-            url_without_fragment = original_url.split('#')[0]
-            fragment_part = original_url[len(url_without_fragment):]
-            absolute_url = urljoin(upstream_base_url, url_without_fragment) + fragment_part
-        else:
-            absolute_url = original_url
-
-        # Extract the filename from the URL
-        parsed = urlparse(absolute_url)
-        path_parts = parsed.path.split('/')
-        filename = path_parts[-1] if path_parts else ''
-
-        # Keep the hash fragment if present
-        fragment = f"#{parsed.fragment}" if parsed.fragment else ""
-
-        # Encode the absolute URL (without fragment) for safe transmission
-        encoded_url = quote(absolute_url.split('#')[0], safe='')
-
-        # Build new URL pointing to our proxy
-        new_url = f"{base_url}/pypi/simple/{package_name}/{filename}?upstream={encoded_url}{fragment}"
-
-        return f'href="{new_url}"'
-
-    # Match href="..." patterns
-    rewritten = re.sub(r'href="([^"]+)"', replace_href, html)
-
-    return rewritten
-
-
-@router.get("/simple/")
-async def pypi_simple_index(
-    request: Request,
-    db: Session = Depends(get_db),
-):
-    """
-    PyPI Simple API index - lists all packages.
-
-    Proxies to the first available upstream PyPI source.
-    """
-    sources = _get_pypi_upstream_sources(db)
-
-    if not sources:
-        raise HTTPException(
-            status_code=503,
-            detail="No PyPI upstream sources configured"
-        )
-
-    # Try each source in priority order
-    last_error = None
-    for source in sources:
-        try:
-            headers = {"User-Agent": "Orchard-PyPI-Proxy/1.0"}
-            headers.update(_build_auth_headers(source))
-            auth = _get_basic_auth(source)
-
-            # Use URL as-is - users should provide full path including /simple
-            simple_url = source.url.rstrip('/') + '/'
-
-            timeout = httpx.Timeout(PROXY_READ_TIMEOUT, connect=PROXY_CONNECT_TIMEOUT)
-
-            with httpx.Client(timeout=timeout, follow_redirects=False) as client:
-                response = client.get(
-                    simple_url,
-                    headers=headers,
-                    auth=auth,
-                )
-
-                # Handle redirects manually to avoid loops
-                if response.status_code in (301, 302, 303, 307, 308):
-                    redirect_url = response.headers.get('location')
-                    if redirect_url:
-                        # Follow the redirect once
-                        response = client.get(
-                            redirect_url,
-                            headers=headers,
-                            auth=auth,
-                            follow_redirects=False,
-                        )
-
-                if response.status_code == 200:
-                    # Return the index as-is (links are to package pages, not files)
-                    # We could rewrite these too, but for now just proxy
-                    content = response.text
-
-                    # Rewrite package links to go through our proxy
-                    base_url = _get_base_url(request)
-                    content = re.sub(
-                        r'href="([^"]+)/"',
-                        lambda m: f'href="{base_url}/pypi/simple/{m.group(1)}/"',
-                        content
-                    )
-
-                    return HTMLResponse(content=content)
-
-                last_error = f"HTTP {response.status_code}"
-
-        except httpx.ConnectError as e:
-            last_error = f"Connection failed: {e}"
-            logger.warning(f"PyPI proxy: failed to connect to {source.url}: {e}")
-        except httpx.TimeoutException as e:
-            last_error = f"Timeout: {e}"
-            logger.warning(f"PyPI proxy: timeout connecting to {source.url}: {e}")
-        except Exception as e:
-            last_error = str(e)
-            logger.warning(f"PyPI proxy: error fetching from {source.url}: {e}")
-
-    raise HTTPException(
-        status_code=502,
-        detail=f"Failed to fetch package index from upstream: {last_error}"
-    )
-
-
-@router.get("/simple/{package_name}/")
-async def pypi_package_versions(
-    request: Request,
-    package_name: str,
-    db: Session = Depends(get_db),
-):
-    """
-    PyPI Simple API package page - lists all versions/files for a package.
-
-    Proxies to upstream and rewrites download links to go through our cache.
-    """
-    sources = _get_pypi_upstream_sources(db)
-
-    if not sources:
-        raise HTTPException(
-            status_code=503,
-            detail="No PyPI upstream sources configured"
-        )
-
-    base_url = _get_base_url(request)
-
-    # Normalize package name (PEP 503)
-    normalized_name = re.sub(r'[-_.]+', '-', package_name).lower()
-
-    # Try each source in priority order
-    last_error = None
-    for source in sources:
-        try:
-            headers = {"User-Agent": "Orchard-PyPI-Proxy/1.0"}
-            headers.update(_build_auth_headers(source))
-            auth = _get_basic_auth(source)
-
-            # Use URL as-is - users should provide full path including /simple
-            package_url = source.url.rstrip('/') + f'/{normalized_name}/'
-            final_url = package_url  # Track final URL after redirects
-
-            timeout = httpx.Timeout(PROXY_READ_TIMEOUT, connect=PROXY_CONNECT_TIMEOUT)
-
-            with httpx.Client(timeout=timeout, follow_redirects=False) as client:
-                response = client.get(
-                    package_url,
-                    headers=headers,
-                    auth=auth,
-                )
-
-                # Handle redirects manually
-                redirect_count = 0
-                while response.status_code in (301, 302, 303, 307, 308) and redirect_count < 5:
-                    redirect_url = response.headers.get('location')
-                    if not redirect_url:
-                        break
-
-                    # Make redirect URL absolute if needed
-                    if not redirect_url.startswith('http'):
-                        redirect_url = urljoin(final_url, redirect_url)
-
-                    final_url = redirect_url  # Update final URL
-
-                    response = client.get(
-                        redirect_url,
-                        headers=headers,
-                        auth=auth,
-                        follow_redirects=False,
-                    )
-                    redirect_count += 1
-
-                if response.status_code == 200:
-                    content = response.text
-
-                    # Rewrite download links to go through our proxy
-                    # Pass final_url so relative URLs can be resolved correctly
-                    content = _rewrite_package_links(content, base_url, normalized_name, final_url)
-
-                    return HTMLResponse(content=content)
-
-                if response.status_code == 404:
-                    # Package not found in this source, try next
-                    last_error = f"Package not found in {source.name}"
-                    continue
-
-                last_error = f"HTTP {response.status_code}"
-
-        except httpx.ConnectError as e:
-            last_error = f"Connection failed: {e}"
-            logger.warning(f"PyPI proxy: failed to connect to {source.url}: {e}")
-        except httpx.TimeoutException as e:
-            last_error = f"Timeout: {e}"
-            logger.warning(f"PyPI proxy: timeout connecting to {source.url}: {e}")
-        except Exception as e:
-            last_error = str(e)
-            logger.warning(f"PyPI proxy: error fetching {package_name} from {source.url}: {e}")
-
-    raise HTTPException(
-        status_code=404,
-        detail=f"Package '{package_name}' not found: {last_error}"
-    )
-
-
-@router.get("/simple/{package_name}/{filename}")
-async def pypi_download_file(
-    request: Request,
-    package_name: str,
-    filename: str,
-    upstream: Optional[str] = None,
-    db: Session = Depends(get_db),
-    storage: S3Storage = Depends(get_storage),
-):
-    """
-    Download a package file, caching it in Orchard.
-
-    Args:
-        package_name: The package name
-        filename: The filename to download
-        upstream: URL-encoded upstream URL to fetch from
-    """
-    if not upstream:
-        raise HTTPException(
-            status_code=400,
-            detail="Missing 'upstream' query parameter with source URL"
-        )
-
-    # Decode the upstream URL
-    upstream_url = unquote(upstream)
-
-    # Check if we already have this URL cached
-    url_hash = hashlib.sha256(upstream_url.encode()).hexdigest()
-    cached_url = db.query(CachedUrl).filter(CachedUrl.url_hash == url_hash).first()
-
-    if cached_url:
-        # Serve from cache
-        artifact = db.query(Artifact).filter(Artifact.id == cached_url.artifact_id).first()
-        if artifact:
-            logger.info(f"PyPI proxy: serving cached {filename} (artifact {artifact.id[:12]})")
-
-            # Stream from S3
-            try:
-                stream, content_length, _ = storage.get_stream(artifact.s3_key)
-
-                def stream_content():
-                    """Generator that yields chunks from the S3 stream."""
-                    try:
-                        for chunk in stream.iter_chunks():
-                            yield chunk
-                    finally:
-                        stream.close()
-
-                return StreamingResponse(
-                    stream_content(),
-                    media_type=artifact.content_type or "application/octet-stream",
-                    headers={
-                        "Content-Disposition": f'attachment; filename="{filename}"',
-                        "Content-Length": str(content_length),
-                        "X-Checksum-SHA256": artifact.id,
-                        "X-Cache": "HIT",
-                    }
-                )
-            except Exception as e:
-                logger.error(f"PyPI proxy: error streaming cached artifact: {e}")
-                # Fall through to fetch from upstream
-
-    # Not cached - fetch from upstream
-    sources = _get_pypi_upstream_sources(db)
-
-    # Use the first available source for authentication headers
-    # Note: The upstream URL may point to files.pythonhosted.org or other CDNs,
-    # not the configured source URL directly, so we can't strictly validate the host
-    matched_source = sources[0] if sources else None
-
-    try:
-        headers = {"User-Agent": "Orchard-PyPI-Proxy/1.0"}
-        if matched_source:
-            headers.update(_build_auth_headers(matched_source))
-        auth = _get_basic_auth(matched_source) if matched_source else None
-
-        timeout = httpx.Timeout(300.0, connect=PROXY_CONNECT_TIMEOUT)  # 5 minutes for large files
-
-        # Fetch the file
-        logger.info(f"PyPI proxy: fetching {filename} from {upstream_url}")
-
-        with httpx.Client(timeout=timeout, follow_redirects=False) as client:
-            response = client.get(
-                upstream_url,
-                headers=headers,
-                auth=auth,
-            )
-
-            # Handle redirects manually
-            redirect_count = 0
-            while response.status_code in (301, 302, 303, 307, 308) and redirect_count < 5:
-                redirect_url = response.headers.get('location')
-                if not redirect_url:
-                    break
-
-                if not redirect_url.startswith('http'):
-                    redirect_url = urljoin(upstream_url, redirect_url)
-
-                logger.info(f"PyPI proxy: following redirect to {redirect_url}")
-
-                # Don't send auth to different hosts
-                redirect_headers = {"User-Agent": "Orchard-PyPI-Proxy/1.0"}
-                redirect_auth = None
-                if urlparse(redirect_url).netloc == urlparse(upstream_url).netloc:
-                    redirect_headers.update(headers)
-                    redirect_auth = auth
-
-                response = client.get(
-                    redirect_url,
-                    headers=redirect_headers,
-                    auth=redirect_auth,
-                    follow_redirects=False,
-                )
-                redirect_count += 1
-
-            if response.status_code != 200:
-                raise HTTPException(
-                    status_code=response.status_code,
-                    detail=f"Upstream returned {response.status_code}"
-                )
-
-            content = response.content
-            content_type = response.headers.get('content-type', 'application/octet-stream')
-
-        # Store in S3 (computes hash and deduplicates automatically)
-        from io import BytesIO
-        result = storage.store(BytesIO(content))
-        sha256 = result.sha256
-        size = result.size
-
-        logger.info(f"PyPI proxy: downloaded {filename}, {size} bytes, sha256={sha256[:12]}")
-
-        # Check if artifact already exists
-        existing = db.query(Artifact).filter(Artifact.id == sha256).first()
-        if existing:
-            # Increment ref count
-            existing.ref_count += 1
-            db.flush()
-        else:
-            # Create artifact record
-            new_artifact = Artifact(
-                id=sha256,
-                original_name=filename,
-                content_type=content_type,
-                size=size,
-                ref_count=1,
-                created_by="pypi-proxy",
-                s3_key=result.s3_key,
-                checksum_md5=result.md5,
-                checksum_sha1=result.sha1,
-                s3_etag=result.s3_etag,
-            )
-            db.add(new_artifact)
-            db.flush()
-
-        # Create/get system project and package
-        system_project = db.query(Project).filter(Project.name == "_pypi").first()
-        if not system_project:
-            system_project = Project(
-                name="_pypi",
-                description="System project for cached PyPI packages",
-                is_public=True,
-                is_system=True,
-                created_by="pypi-proxy",
-            )
-            db.add(system_project)
-            db.flush()
-        elif not system_project.is_system:
-            # Ensure existing project is marked as system
-            system_project.is_system = True
-            db.flush()
-
-        # Normalize package name
-        normalized_name = re.sub(r'[-_.]+', '-', package_name).lower()
-
-        package = db.query(Package).filter(
-            Package.project_id == system_project.id,
-            Package.name == normalized_name,
-        ).first()
-        if not package:
-            package = Package(
-                project_id=system_project.id,
-                name=normalized_name,
-                description=f"PyPI package: {normalized_name}",
-                format="pypi",
-            )
-            db.add(package)
-            db.flush()
-
-        # Create tag with filename
-        existing_tag = db.query(Tag).filter(
-            Tag.package_id == package.id,
-            Tag.name == filename,
-        ).first()
-        if not existing_tag:
-            tag = Tag(
-                package_id=package.id,
-                name=filename,
-                artifact_id=sha256,
-                created_by="pypi-proxy",
-            )
-            db.add(tag)
-
-        # Extract and create version
-        # Only create version for actual package files, not .metadata files
-        version = _extract_pypi_version(filename)
-        if version and not filename.endswith('.metadata'):
-            # Check by version string (the unique constraint is on package_id + version)
-            existing_version = db.query(PackageVersion).filter(
-                PackageVersion.package_id == package.id,
-                PackageVersion.version == version,
-            ).first()
-            if not existing_version:
-                pkg_version = PackageVersion(
-                    package_id=package.id,
-                    artifact_id=sha256,
-                    version=version,
-                    version_source="filename",
-                    created_by="pypi-proxy",
-                )
-                db.add(pkg_version)
-
-        # Cache the URL mapping
-        existing_cached = db.query(CachedUrl).filter(CachedUrl.url_hash == url_hash).first()
-        if not existing_cached:
-            cached_url_record = CachedUrl(
-                url_hash=url_hash,
-                url=upstream_url,
-                artifact_id=sha256,
-            )
-            db.add(cached_url_record)
-
-        # Extract and store dependencies
-        dependencies = _extract_dependencies(content, filename)
-        if dependencies:
-            logger.info(f"PyPI proxy: extracted {len(dependencies)} dependencies from {filename}")
-            for dep_name, dep_version in dependencies:
-                # Check if this dependency already exists for this artifact
-                existing_dep = db.query(ArtifactDependency).filter(
-                    ArtifactDependency.artifact_id == sha256,
-                    ArtifactDependency.dependency_project == "_pypi",
-                    ArtifactDependency.dependency_package == dep_name,
-                ).first()
-
-                if not existing_dep:
-                    dep = ArtifactDependency(
-                        artifact_id=sha256,
-                        dependency_project="_pypi",
-                        dependency_package=dep_name,
-                        version_constraint=dep_version if dep_version else "*",
-                    )
-                    db.add(dep)
-
-        db.commit()
-
-        # Return the file
-        return Response(
-            content=content,
-            media_type=content_type,
-            headers={
-                "Content-Disposition": f'attachment; filename="{filename}"',
-                "Content-Length": str(size),
-                "X-Checksum-SHA256": sha256,
-                "X-Cache": "MISS",
-            }
-        )
-
-    except httpx.ConnectError as e:
-        raise HTTPException(status_code=502, detail=f"Connection failed: {e}")
-    except httpx.TimeoutException as e:
-        raise HTTPException(status_code=504, detail=f"Timeout: {e}")
-    except HTTPException:
-        raise
-    except Exception as e:
-        logger.exception(f"PyPI proxy: error downloading {filename}")
-        raise HTTPException(status_code=500, detail=str(e))

backend/app/routes.py

@@ -1680,7 +1680,6 @@ def create_project(
         name=db_project.name,
         description=db_project.description,
         is_public=db_project.is_public,
-        is_system=db_project.is_system,
         created_at=db_project.created_at,
         updated_at=db_project.updated_at,
         created_by=db_project.created_by,
@@ -1705,7 +1704,6 @@ def get_project(
         name=project.name,
         description=project.description,
         is_public=project.is_public,
-        is_system=project.is_system,
         created_at=project.created_at,
         updated_at=project.updated_at,
         created_by=project.created_by,
@@ -2706,7 +2704,6 @@ def list_team_projects(
                 name=p.name,
                 description=p.description,
                 is_public=p.is_public,
-                is_system=p.is_system,
                 created_at=p.created_at,
                 updated_at=p.updated_at,
                 created_by=p.created_by,
@@ -2830,15 +2827,14 @@ def list_packages(
             db.query(func.count(Tag.id)).filter(Tag.package_id == pkg.id).scalar() or 0
         )
 
-        # Get unique artifact count and total size via tags
+        # Get unique artifact count and total size via uploads
-        # (PyPI proxy creates tags without uploads, so query from tags)
         artifact_stats = (
             db.query(
-                func.count(func.distinct(Tag.artifact_id)),
+                func.count(func.distinct(Upload.artifact_id)),
                 func.coalesce(func.sum(Artifact.size), 0),
             )
-            .join(Artifact, Tag.artifact_id == Artifact.id)
+            .join(Artifact, Upload.artifact_id == Artifact.id)
-            .filter(Tag.package_id == pkg.id)
+            .filter(Upload.package_id == pkg.id)
             .first()
         )
         artifact_count = artifact_stats[0] if artifact_stats else 0
@@ -2934,15 +2930,14 @@ def get_package(
         db.query(func.count(Tag.id)).filter(Tag.package_id == pkg.id).scalar() or 0
     )
 
-    # Get unique artifact count and total size via tags
+    # Get unique artifact count and total size via uploads
-    # (PyPI proxy creates tags without uploads, so query from tags)
     artifact_stats = (
         db.query(
-            func.count(func.distinct(Tag.artifact_id)),
+            func.count(func.distinct(Upload.artifact_id)),
             func.coalesce(func.sum(Artifact.size), 0),
         )
-        .join(Artifact, Tag.artifact_id == Artifact.id)
+        .join(Artifact, Upload.artifact_id == Artifact.id)
-        .filter(Tag.package_id == pkg.id)
+        .filter(Upload.package_id == pkg.id)
         .first()
     )
     artifact_count = artifact_stats[0] if artifact_stats else 0
@@ -6285,14 +6280,14 @@ def get_package_stats(
         db.query(func.count(Tag.id)).filter(Tag.package_id == package.id).scalar() or 0
     )
 
-    # Artifact stats via tags (tags exist for both user uploads and PyPI proxy)
+    # Artifact stats via uploads
     artifact_stats = (
         db.query(
-            func.count(func.distinct(Tag.artifact_id)),
+            func.count(func.distinct(Upload.artifact_id)),
             func.coalesce(func.sum(Artifact.size), 0),
         )
-        .join(Artifact, Tag.artifact_id == Artifact.id)
+        .join(Artifact, Upload.artifact_id == Artifact.id)
-        .filter(Tag.package_id == package.id)
+        .filter(Upload.package_id == package.id)
         .first()
     )
     artifact_count = artifact_stats[0] if artifact_stats else 0
@@ -8310,200 +8305,6 @@ def _create_user_cache_reference(
     return f"{user_project_name}/{user_package_name}"
 
 
-# --- Cache Resolve Endpoint ---
-
-from .schemas import CacheResolveRequest
-
-
-@router.post(
-    "/api/v1/cache/resolve",
-    response_model=CacheResponse,
-    tags=["cache"],
-    summary="Cache an artifact by package coordinates",
-)
-def cache_resolve(
-    request: Request,
-    resolve_request: CacheResolveRequest,
-    db: Session = Depends(get_db),
-    storage: S3Storage = Depends(get_storage),
-    current_user: User = Depends(get_current_user),
-):
-    """
-    Cache an artifact by package coordinates (no URL required).
-
-    The server finds the appropriate download URL based on source_type
-    and configured upstream sources. Currently supports PyPI packages.
-
-    **Request Body:**
-    - `source_type` (required): Type of source (pypi, npm, maven, etc.)
-    - `package` (required): Package name
-    - `version` (required): Package version
-    - `user_project` (optional): Also create reference in this user project
-    - `user_package` (optional): Package name in user project
-    - `user_tag` (optional): Tag name in user project
-
-    **Example (curl):**
-    ```bash
-    curl -X POST "http://localhost:8080/api/v1/cache/resolve" \\
-      -H "Authorization: Bearer <api-key>" \\
-      -H "Content-Type: application/json" \\
-      -d '{
-        "source_type": "pypi",
-        "package": "requests",
-        "version": "2.31.0"
-      }'
-    ```
-    """
-    import re
-    import httpx
-    from urllib.parse import quote, unquote
-
-    if resolve_request.source_type != "pypi":
-        raise HTTPException(
-            status_code=501,
-            detail=f"Cache resolve for '{resolve_request.source_type}' not yet implemented. Currently only 'pypi' is supported."
-        )
-
-    # Get PyPI upstream sources
-    sources = (
-        db.query(UpstreamSource)
-        .filter(
-            UpstreamSource.source_type == "pypi",
-            UpstreamSource.enabled == True,
-        )
-        .order_by(UpstreamSource.priority)
-        .all()
-    )
-
-    # Also get env sources
-    env_sources = [
-        s for s in get_env_upstream_sources()
-        if s.source_type == "pypi" and s.enabled
-    ]
-    all_sources = list(sources) + list(env_sources)
-    all_sources = sorted(all_sources, key=lambda s: s.priority)
-
-    if not all_sources:
-        raise HTTPException(
-            status_code=503,
-            detail="No PyPI upstream sources configured"
-        )
-
-    # Normalize package name (PEP 503)
-    normalized_package = re.sub(r'[-_.]+', '-', resolve_request.package).lower()
-
-    # Query the Simple API to find the download URL
-    download_url = None
-    matched_filename = None
-    last_error = None
-
-    for source in all_sources:
-        try:
-            headers = {"User-Agent": "Orchard-CacheResolver/1.0"}
-
-            # Build auth if needed
-            if hasattr(source, 'auth_type'):
-                if source.auth_type == "bearer":
-                    password = source.get_password() if hasattr(source, 'get_password') else getattr(source, 'password', None)
-                    if password:
-                        headers["Authorization"] = f"Bearer {password}"
-                elif source.auth_type == "api_key":
-                    custom_headers = source.get_headers() if hasattr(source, 'get_headers') else {}
-                    if custom_headers:
-                        headers.update(custom_headers)
-
-            auth = None
-            if hasattr(source, 'auth_type') and source.auth_type == "basic":
-                username = getattr(source, 'username', None)
-                if username:
-                    password = source.get_password() if hasattr(source, 'get_password') else getattr(source, 'password', '')
-                    auth = (username, password or '')
-
-            source_url = getattr(source, 'url', '')
-            package_url = source_url.rstrip('/') + f'/simple/{normalized_package}/'
-
-            timeout = httpx.Timeout(connect=30.0, read=60.0)
-
-            with httpx.Client(timeout=timeout, follow_redirects=True) as client:
-                response = client.get(package_url, headers=headers, auth=auth)
-
-                if response.status_code == 404:
-                    last_error = f"Package not found in {getattr(source, 'name', 'source')}"
-                    continue
-
-                if response.status_code != 200:
-                    last_error = f"HTTP {response.status_code} from {getattr(source, 'name', 'source')}"
-                    continue
-
-                # Parse HTML to find the version
-                html = response.text
-                # Look for links containing the version
-                # Pattern: href="...{package}-{version}...#sha256=..."
-                version_pattern = re.escape(resolve_request.version)
-                link_pattern = rf'href="([^"]+{normalized_package}[^"]*{version_pattern}[^"]*)"'
-
-                matches = re.findall(link_pattern, html, re.IGNORECASE)
-
-                if not matches:
-                    # Try with original package name
-                    link_pattern = rf'href="([^"]+{re.escape(resolve_request.package)}[^"]*{version_pattern}[^"]*)"'
-                    matches = re.findall(link_pattern, html, re.IGNORECASE)
-
-                if matches:
-                    # Prefer .tar.gz or .whl files
-                    for match in matches:
-                        url = match.split('#')[0]  # Remove hash fragment
-                        if url.endswith('.tar.gz') or url.endswith('.whl'):
-                            download_url = url
-                            # Extract filename
-                            matched_filename = url.split('/')[-1]
-                            break
-                    if not download_url:
-                        # Use first match
-                        download_url = matches[0].split('#')[0]
-                        matched_filename = download_url.split('/')[-1]
-                    break
-
-                last_error = f"Version {resolve_request.version} not found for {resolve_request.package}"
-
-        except httpx.ConnectError as e:
-            last_error = f"Connection failed: {e}"
-            logger.warning(f"Cache resolve: failed to connect to {getattr(source, 'url', 'source')}: {e}")
-        except httpx.TimeoutException as e:
-            last_error = f"Timeout: {e}"
-            logger.warning(f"Cache resolve: timeout connecting to {getattr(source, 'url', 'source')}: {e}")
-        except Exception as e:
-            last_error = str(e)
-            logger.warning(f"Cache resolve: error: {e}")
-
-    if not download_url:
-        raise HTTPException(
-            status_code=404,
-            detail=f"Could not find {resolve_request.package}=={resolve_request.version}: {last_error}"
-        )
-
-    # Now cache the artifact using the existing cache_artifact logic
-    # Construct a CacheRequest
-    cache_request = CacheRequest(
-        url=download_url,
-        source_type="pypi",
-        package_name=normalized_package,
-        tag=matched_filename or resolve_request.version,
-        user_project=resolve_request.user_project,
-        user_package=resolve_request.user_package,
-        user_tag=resolve_request.user_tag,
-    )
-
-    # Call the cache logic
-    return cache_artifact(
-        request=request,
-        cache_request=cache_request,
-        db=db,
-        storage=storage,
-        current_user=current_user,
-    )
-
-
 # --- Upstream Sources Admin API ---
 
 from .schemas import (

backend/app/schemas.py

@@ -33,7 +33,6 @@ class ProjectResponse(BaseModel):
     name: str
     description: Optional[str]
     is_public: bool
-    is_system: bool = False
     created_at: datetime
     updated_at: datetime
     created_by: str
@@ -1433,41 +1432,4 @@ class CacheResponse(BaseModel):
     user_reference: Optional[str] = None  # e.g., "my-app/npm-deps:lodash-4.17.21"
 
 
-class CacheResolveRequest(BaseModel):
-    """Request to cache an artifact by package coordinates (no URL required).
-
-    The server will construct the appropriate URL based on source_type and
-    configured upstream sources.
-    """
-    source_type: str
-    package: str
-    version: str
-    user_project: Optional[str] = None
-    user_package: Optional[str] = None
-    user_tag: Optional[str] = None
-
-    @field_validator('source_type')
-    @classmethod
-    def validate_source_type(cls, v: str) -> str:
-        if v not in SOURCE_TYPES:
-            raise ValueError(f"source_type must be one of: {', '.join(SOURCE_TYPES)}")
-        return v
-
-    @field_validator('package')
-    @classmethod
-    def validate_package(cls, v: str) -> str:
-        v = v.strip()
-        if not v:
-            raise ValueError("package cannot be empty")
-        return v
-
-    @field_validator('version')
-    @classmethod
-    def validate_version(cls, v: str) -> str:
-        v = v.strip()
-        if not v:
-            raise ValueError("version cannot be empty")
-        return v
-
-
 

backend/tests/integration/test_projects_api.py

@@ -128,9 +128,7 @@ class TestProjectListingFilters:
         assert response.status_code == 200
 
         data = response.json()
-        # Filter out system projects (names starting with "_") as they may have
+        names = [p["name"] for p in data["items"]]
-        # collation-specific sort behavior and aren't part of the test data
-        names = [p["name"] for p in data["items"] if not p["name"].startswith("_")]
         assert names == sorted(names)
 
 

backend/tests/integration/test_pypi_proxy.py

@@ -1,137 +0,0 @@
-"""Integration tests for PyPI transparent proxy."""
-
-import os
-import pytest
-import httpx
-
-
-def get_base_url():
-    """Get the base URL for the Orchard server from environment."""
-    return os.environ.get("ORCHARD_TEST_URL", "http://localhost:8080")
-
-
-class TestPyPIProxyEndpoints:
-    """Tests for PyPI proxy endpoints.
-
-    These endpoints are public (no auth required) since pip needs to use them.
-    """
-
-    @pytest.mark.integration
-    def test_pypi_simple_index(self):
-        """Test that /pypi/simple/ returns HTML response."""
-        with httpx.Client(base_url=get_base_url(), timeout=30.0) as client:
-            response = client.get("/pypi/simple/")
-            # Returns 200 if sources configured, 503 if not
-            assert response.status_code in (200, 503)
-            if response.status_code == 200:
-                assert "text/html" in response.headers.get("content-type", "")
-            else:
-                assert "No PyPI upstream sources configured" in response.json()["detail"]
-
-    @pytest.mark.integration
-    def test_pypi_package_endpoint(self):
-        """Test that /pypi/simple/{package}/ returns appropriate response."""
-        with httpx.Client(base_url=get_base_url(), timeout=30.0) as client:
-            response = client.get("/pypi/simple/requests/")
-            # Returns 200 if sources configured and package found,
-            # 404 if package not found, 503 if no sources
-            assert response.status_code in (200, 404, 503)
-            if response.status_code == 200:
-                assert "text/html" in response.headers.get("content-type", "")
-            elif response.status_code == 404:
-                assert "not found" in response.json()["detail"].lower()
-            else:  # 503
-                assert "No PyPI upstream sources configured" in response.json()["detail"]
-
-    @pytest.mark.integration
-    def test_pypi_download_missing_upstream_param(self):
-        """Test that /pypi/simple/{package}/{filename} requires upstream param."""
-        with httpx.Client(base_url=get_base_url(), timeout=30.0) as client:
-            response = client.get("/pypi/simple/requests/requests-2.31.0.tar.gz")
-            assert response.status_code == 400
-            assert "upstream" in response.json()["detail"].lower()
-
-
-class TestPyPILinkRewriting:
-    """Tests for URL rewriting in PyPI proxy responses."""
-
-    def test_rewrite_package_links(self):
-        """Test that download links are rewritten to go through proxy."""
-        from app.pypi_proxy import _rewrite_package_links
-
-        html = '''
-        <html>
-        <body>
-        <a href="https://files.pythonhosted.org/packages/ab/cd/requests-2.31.0.tar.gz#sha256=abc123">requests-2.31.0.tar.gz</a>
-        <a href="https://files.pythonhosted.org/packages/ef/gh/requests-2.31.0-py3-none-any.whl#sha256=def456">requests-2.31.0-py3-none-any.whl</a>
-        </body>
-        </html>
-        '''
-
-        # upstream_base_url is used to resolve relative URLs (not needed here since URLs are absolute)
-        result = _rewrite_package_links(
-            html,
-            "http://localhost:8080",
-            "requests",
-            "https://pypi.org/simple/requests/"
-        )
-
-        # Links should be rewritten to go through our proxy
-        assert "/pypi/simple/requests/requests-2.31.0.tar.gz?upstream=" in result
-        assert "/pypi/simple/requests/requests-2.31.0-py3-none-any.whl?upstream=" in result
-        # Original URLs should be encoded in upstream param
-        assert "files.pythonhosted.org" in result
-        # Hash fragments should be preserved
-        assert "#sha256=abc123" in result
-        assert "#sha256=def456" in result
-
-    def test_rewrite_relative_links(self):
-        """Test that relative URLs are resolved to absolute URLs."""
-        from app.pypi_proxy import _rewrite_package_links
-
-        # Artifactory-style relative URLs
-        html = '''
-        <html>
-        <body>
-        <a href="../../packages/ab/cd/requests-2.31.0.tar.gz#sha256=abc123">requests-2.31.0.tar.gz</a>
-        </body>
-        </html>
-        '''
-
-        result = _rewrite_package_links(
-            html,
-            "https://orchard.example.com",
-            "requests",
-            "https://artifactory.example.com/api/pypi/pypi-remote/simple/requests/"
-        )
-
-        # The relative URL should be resolved to absolute
-        # ../../packages/ab/cd/... from /api/pypi/pypi-remote/simple/requests/ resolves to /api/pypi/pypi-remote/packages/ab/cd/...
-        assert "upstream=https%3A%2F%2Fartifactory.example.com%2Fapi%2Fpypi%2Fpypi-remote%2Fpackages" in result
-        # Hash fragment should be preserved
-        assert "#sha256=abc123" in result
-
-
-class TestPyPIPackageNormalization:
-    """Tests for PyPI package name normalization."""
-
-    @pytest.mark.integration
-    def test_package_name_normalized(self):
-        """Test that package names are normalized per PEP 503.
-
-        Different capitalizations/separators should all be valid paths.
-        The endpoint normalizes to lowercase with hyphens before lookup.
-        """
-        with httpx.Client(base_url=get_base_url(), timeout=30.0) as client:
-            # Test various name formats - all should be valid endpoint paths
-            for package_name in ["Requests", "some_package", "some-package"]:
-                response = client.get(f"/pypi/simple/{package_name}/")
-                # 200 = found, 404 = not found, 503 = no sources configured
-                assert response.status_code in (200, 404, 503), \
-                    f"Unexpected status {response.status_code} for {package_name}"
-
-                # Verify response is appropriate for the status code
-                if response.status_code == 200:
-                    assert "text/html" in response.headers.get("content-type", "")
-                elif response.status_code == 503:
-                    assert "No PyPI upstream sources configured" in response.json()["detail"]

frontend/src/components/Layout.css

@@ -272,7 +272,7 @@
 .footer {
   background: var(--bg-secondary);
   border-top: 1px solid var(--border-primary);
-  padding: 12px 0;
+  padding: 24px 0;
 }
 
 .footer-content {

frontend/src/pages/AdminCachePage.css

@@ -65,7 +65,7 @@
 .sources-table th,
 .sources-table td {
   padding: 0.75rem 1rem;
-  text-align: center;
+  text-align: left;
   border-bottom: 1px solid var(--border-color);
 }
 
@@ -91,11 +91,6 @@
   white-space: nowrap;
 }
 
-/* Name column should be left-aligned */
-.sources-table td:first-child {
-  text-align: left;
-}
-
 .url-cell {
   font-family: monospace;
   font-size: 0.9rem;
@@ -103,7 +98,6 @@
   overflow: hidden;
   text-overflow: ellipsis;
   white-space: nowrap;
-  text-align: left;
 }
 
 /* Badges */
@@ -132,12 +126,6 @@
   color: #c62828;
 }
 
-.coming-soon-badge {
-  color: #9e9e9e;
-  font-style: italic;
-  font-size: 0.85em;
-}
-
 /* Actions */
 .actions-cell {
   white-space: nowrap;
@@ -255,22 +243,10 @@
 }
 
 .btn-sm {
-  padding: 0.25rem 0.75rem;
+  padding: 0.25rem 0.5rem;
   font-size: 0.8rem;
 }
 
-.btn-secondary {
-  background-color: var(--bg-tertiary);
-  border-color: var(--border-color);
-  color: var(--text-primary);
-  font-weight: 500;
-}
-
-.btn-secondary:hover {
-  background-color: var(--bg-secondary);
-  border-color: var(--text-secondary);
-}
-
 .empty-message {
   color: var(--text-secondary);
   font-style: italic;

frontend/src/pages/AdminCachePage.tsx

@@ -12,7 +12,6 @@ import { UpstreamSource, SourceType, AuthType } from '../types';
 import './AdminCachePage.css';
 
 const SOURCE_TYPES: SourceType[] = ['npm', 'pypi', 'maven', 'docker', 'helm', 'nuget', 'deb', 'rpm', 'generic'];
-const SUPPORTED_SOURCE_TYPES: Set<SourceType> = new Set(['pypi', 'generic']);
 const AUTH_TYPES: AuthType[] = ['none', 'basic', 'bearer', 'api_key'];
 
 function AdminCachePage() {
@@ -273,7 +272,8 @@ function AdminCachePage() {
                 <th>URL</th>
                 <th>Priority</th>
                 <th>Status</th>
-                <th>Test</th>
+                <th>Source</th>
+                <th></th>
                 <th>Actions</th>
               </tr>
             </thead>
@@ -282,23 +282,24 @@ function AdminCachePage() {
                 <tr key={source.id} className={source.enabled ? '' : 'disabled-row'}>
                   <td>
                     <span className="source-name">{source.name}</span>
-                    {source.source === 'env' && (
-                      <span className="env-badge" title="Defined via environment variable">ENV</span>
-                    )}
                   </td>
-                  <td>
+                  <td>{source.source_type}</td>
-                    {source.source_type}
+                  <td className="url-cell">{source.url}</td>
-                    {!SUPPORTED_SOURCE_TYPES.has(source.source_type) && (
-                      <span className="coming-soon-badge"> (coming soon)</span>
-                    )}
-                  </td>
-                  <td className="url-cell" title={source.url}>{source.url}</td>
                   <td>{source.priority}</td>
                   <td>
                     <span className={`status-badge ${source.enabled ? 'enabled' : 'disabled'}`}>
                       {source.enabled ? 'Enabled' : 'Disabled'}
                     </span>
                   </td>
+                  <td>
+                    {source.source === 'env' ? (
+                      <span className="env-badge" title="Defined via environment variable">
+                        ENV
+                      </span>
+                    ) : (
+                      'Database'
+                    )}
+                  </td>
                   <td className="test-cell">
                     {testingId === source.id ? (
                       <span className="test-dot testing" title="Testing...">●</span>
@@ -316,14 +317,14 @@ function AdminCachePage() {
                   </td>
                   <td className="actions-cell">
                     <button
-                      className="btn btn-sm btn-secondary"
+                      className="btn btn-sm"
                       onClick={() => handleTest(source)}
                       disabled={testingId === source.id}
                     >
                       Test
                     </button>
                     {source.source !== 'env' && (
-                      <button className="btn btn-sm btn-secondary" onClick={() => openEditForm(source)}>
+                      <button className="btn btn-sm" onClick={() => openEditForm(source)}>
                         Edit
                       </button>
                     )}
@@ -365,7 +366,7 @@ function AdminCachePage() {
                   >
                     {SOURCE_TYPES.map((type) => (
                       <option key={type} value={type}>
-                        {type}{!SUPPORTED_SOURCE_TYPES.has(type) ? ' (coming soon)' : ''}
+                        {type}
                       </option>
                     ))}
                   </select>

frontend/src/pages/Home.tsx

@@ -249,7 +249,7 @@ function Home() {
               key: 'created_by',
               header: 'Owner',
               className: 'cell-owner',
-              render: (project) => project.team_name || project.created_by,
+              render: (project) => project.created_by,
             },
             ...(user
               ? [

frontend/src/pages/PackagePage.css

@@ -793,194 +793,4 @@ tr:hover .copy-btn {
   .ensure-file-modal {
     max-height: 90vh;
   }
-
-  .action-menu-dropdown {
-    right: 0;
-    left: auto;
-  }
-}
-
-/* Header upload button */
-.header-upload-btn {
-  margin-left: auto;
-}
-
-/* Tag/Version cell */
-.tag-version-cell {
-  display: flex;
-  flex-direction: column;
-  gap: 4px;
-}
-
-.tag-version-cell .version-badge {
-  font-size: 0.75rem;
-  color: var(--text-muted);
-}
-
-/* Icon buttons */
-.btn-icon {
-  display: flex;
-  align-items: center;
-  justify-content: center;
-  width: 32px;
-  height: 32px;
-  padding: 0;
-  background: transparent;
-  border: 1px solid transparent;
-  border-radius: var(--radius-sm);
-  color: var(--text-secondary);
-  cursor: pointer;
-  transition: all var(--transition-fast);
-}
-
-.btn-icon:hover {
-  background: var(--bg-hover);
-  color: var(--text-primary);
-}
-
-/* Action menu */
-.action-buttons {
-  display: flex;
-  align-items: center;
-  gap: 4px;
-}
-
-.action-menu {
-  position: relative;
-}
-
-/* Action menu backdrop for click-outside */
-.action-menu-backdrop {
-  position: fixed;
-  top: 0;
-  left: 0;
-  right: 0;
-  bottom: 0;
-  z-index: 999;
-}
-
-.action-menu-dropdown {
-  position: fixed;
-  z-index: 1000;
-  min-width: 180px;
-  padding: 4px 0;
-  background: var(--bg-secondary);
-  border: 1px solid var(--border-primary);
-  border-radius: var(--radius-md);
-  box-shadow: 0 4px 12px rgba(0, 0, 0, 0.15);
-}
-
-.action-menu-dropdown button {
-  display: block;
-  width: 100%;
-  padding: 8px 12px;
-  background: none;
-  border: none;
-  text-align: left;
-  font-size: 0.875rem;
-  color: var(--text-primary);
-  cursor: pointer;
-  transition: background var(--transition-fast);
-}
-
-.action-menu-dropdown button:hover {
-  background: var(--bg-hover);
-}
-
-/* Upload Modal */
-.upload-modal,
-.create-tag-modal {
-  background: var(--bg-secondary);
-  border-radius: var(--radius-lg);
-  width: 90%;
-  max-width: 500px;
-  max-height: 90vh;
-  overflow: hidden;
-}
-
-.modal-header {
-  display: flex;
-  align-items: center;
-  justify-content: space-between;
-  padding: 16px 20px;
-  border-bottom: 1px solid var(--border-primary);
-}
-
-.modal-header h3 {
-  margin: 0;
-  font-size: 1.125rem;
-  font-weight: 600;
-}
-
-.modal-body {
-  padding: 20px;
-}
-
-.modal-description {
-  margin-bottom: 16px;
-  color: var(--text-secondary);
-  font-size: 0.875rem;
-}
-
-.modal-actions {
-  display: flex;
-  justify-content: flex-end;
-  gap: 12px;
-  margin-top: 20px;
-  padding-top: 16px;
-  border-top: 1px solid var(--border-primary);
-}
-
-/* Dependencies Modal */
-.deps-modal {
-  background: var(--bg-secondary);
-  border-radius: var(--radius-lg);
-  width: 90%;
-  max-width: 600px;
-  max-height: 80vh;
-  overflow: hidden;
-  display: flex;
-  flex-direction: column;
-}
-
-.deps-modal .modal-body {
-  overflow-y: auto;
-  flex: 1;
-}
-
-.deps-modal-controls {
-  display: flex;
-  gap: 8px;
-  margin-bottom: 16px;
-}
-
-/* Artifact ID Modal */
-.artifact-id-modal {
-  background: var(--bg-secondary);
-  border-radius: var(--radius-lg);
-  width: 90%;
-  max-width: 500px;
-}
-
-.artifact-id-display {
-  display: flex;
-  align-items: center;
-  gap: 12px;
-  padding: 16px;
-  background: var(--bg-tertiary);
-  border-radius: var(--radius-md);
-  border: 1px solid var(--border-primary);
-}
-
-.artifact-id-display code {
-  font-family: 'JetBrains Mono', 'Fira Code', 'Consolas', monospace;
-  font-size: 0.8125rem;
-  color: var(--text-primary);
-  word-break: break-all;
-  flex: 1;
-}
-
-.artifact-id-display .copy-btn {
-  opacity: 1;
-  flex-shrink: 0;
 }

frontend/src/pages/PackagePage.tsx

@@ -63,17 +63,12 @@ function PackagePage() {
   const [accessDenied, setAccessDenied] = useState(false);
   const [uploadTag, setUploadTag] = useState('');
   const [uploadSuccess, setUploadSuccess] = useState<string | null>(null);
+  const [artifactIdInput, setArtifactIdInput] = useState('');
   const [accessLevel, setAccessLevel] = useState<AccessLevel | null>(null);
   const [createTagName, setCreateTagName] = useState('');
   const [createTagArtifactId, setCreateTagArtifactId] = useState('');
   const [createTagLoading, setCreateTagLoading] = useState(false);
 
-  // UI state
-  const [showUploadModal, setShowUploadModal] = useState(false);
-  const [showCreateTagModal, setShowCreateTagModal] = useState(false);
-  const [openMenuId, setOpenMenuId] = useState<string | null>(null);
-  const [menuPosition, setMenuPosition] = useState<{ top: number; left: number } | null>(null);
-
   // Dependencies state
   const [selectedTag, setSelectedTag] = useState<TagDetail | null>(null);
   const [dependencies, setDependencies] = useState<Dependency[]>([]);
@@ -91,13 +86,6 @@ function PackagePage() {
   // Dependency graph modal state
   const [showGraph, setShowGraph] = useState(false);
 
-  // Dependencies modal state
-  const [showDepsModal, setShowDepsModal] = useState(false);
-
-  // Artifact ID modal state
-  const [showArtifactIdModal, setShowArtifactIdModal] = useState(false);
-  const [viewArtifactId, setViewArtifactId] = useState<string | null>(null);
-
   // Ensure file modal state
   const [showEnsureFile, setShowEnsureFile] = useState(false);
   const [ensureFileContent, setEnsureFileContent] = useState<string | null>(null);
@@ -108,9 +96,6 @@ function PackagePage() {
   // Derived permissions
   const canWrite = accessLevel === 'write' || accessLevel === 'admin';
 
-  // Detect system projects (convention: name starts with "_")
-  const isSystemProject = projectName?.startsWith('_') ?? false;
-
   // Get params from URL
   const page = parseInt(searchParams.get('page') || '1', 10);
   const search = searchParams.get('search') || '';
@@ -338,212 +323,92 @@ function PackagePage() {
     setSelectedTag(tag);
   };
 
-  const handleMenuOpen = (e: React.MouseEvent, tagId: string) => {
+  const columns = [
-    e.stopPropagation();
+    {
-    if (openMenuId === tagId) {
+      key: 'name',
-      setOpenMenuId(null);
+      header: 'Tag',
-      setMenuPosition(null);
+      sortable: true,
-    } else {
+      render: (t: TagDetail) => (
-      const rect = e.currentTarget.getBoundingClientRect();
+        <strong
-      setMenuPosition({ top: rect.bottom + 4, left: rect.right - 180 });
+          className={`tag-name-link ${selectedTag?.id === t.id ? 'selected' : ''}`}
-      setOpenMenuId(tagId);
+          onClick={() => handleTagSelect(t)}
-    }
+          style={{ cursor: 'pointer' }}
-  };
-
-  // System projects show Version first, regular projects show Tag first
-  const columns = isSystemProject
-    ? [
-        // System project columns: Version first, then Filename
-        {
-          key: 'version',
-          header: 'Version',
-          sortable: true,
-          render: (t: TagDetail) => (
-            <strong
-              className={`tag-name-link ${selectedTag?.id === t.id ? 'selected' : ''}`}
-              onClick={() => handleTagSelect(t)}
-              style={{ cursor: 'pointer' }}
-            >
-              <span className="version-badge">{t.version || t.name}</span>
-            </strong>
-          ),
-        },
-        {
-          key: 'artifact_original_name',
-          header: 'Filename',
-          className: 'cell-truncate',
-          render: (t: TagDetail) => (
-            <span title={t.artifact_original_name || t.name}>{t.artifact_original_name || t.name}</span>
-          ),
-        },
-        {
-          key: 'artifact_size',
-          header: 'Size',
-          render: (t: TagDetail) => <span>{formatBytes(t.artifact_size)}</span>,
-        },
-        {
-          key: 'created_at',
-          header: 'Cached',
-          sortable: true,
-          render: (t: TagDetail) => (
-            <span>{new Date(t.created_at).toLocaleDateString()}</span>
-          ),
-        },
-        {
-          key: 'actions',
-          header: '',
-          render: (t: TagDetail) => (
-            <div className="action-buttons">
-              <a
-                href={getDownloadUrl(projectName!, packageName!, t.name)}
-                className="btn btn-icon"
-                download
-                title="Download"
-              >
-                <svg width="16" height="16" viewBox="0 0 24 24" fill="none" stroke="currentColor" strokeWidth="2">
-                  <path d="M21 15v4a2 2 0 0 1-2 2H5a2 2 0 0 1-2-2v-4" />
-                  <polyline points="7 10 12 15 17 10" />
-                  <line x1="12" y1="15" x2="12" y2="3" />
-                </svg>
-              </a>
-              <button
-                className="btn btn-icon"
-                onClick={(e) => handleMenuOpen(e, t.id)}
-                title="More actions"
-              >
-                <svg width="16" height="16" viewBox="0 0 24 24" fill="none" stroke="currentColor" strokeWidth="2">
-                  <circle cx="12" cy="12" r="1" />
-                  <circle cx="12" cy="5" r="1" />
-                  <circle cx="12" cy="19" r="1" />
-                </svg>
-              </button>
-            </div>
-          ),
-        },
-      ]
-    : [
-        // Regular project columns: Tag, Version, Filename
-        {
-          key: 'name',
-          header: 'Tag',
-          sortable: true,
-          render: (t: TagDetail) => (
-            <strong
-              className={`tag-name-link ${selectedTag?.id === t.id ? 'selected' : ''}`}
-              onClick={() => handleTagSelect(t)}
-              style={{ cursor: 'pointer' }}
-            >
-              {t.name}
-            </strong>
-          ),
-        },
-        {
-          key: 'version',
-          header: 'Version',
-          render: (t: TagDetail) => (
-            <span className="version-badge">{t.version || '—'}</span>
-          ),
-        },
-        {
-          key: 'artifact_original_name',
-          header: 'Filename',
-          className: 'cell-truncate',
-          render: (t: TagDetail) => (
-            <span title={t.artifact_original_name || undefined}>{t.artifact_original_name || '—'}</span>
-          ),
-        },
-        {
-          key: 'artifact_size',
-          header: 'Size',
-          render: (t: TagDetail) => <span>{formatBytes(t.artifact_size)}</span>,
-        },
-        {
-          key: 'created_at',
-          header: 'Created',
-          sortable: true,
-          render: (t: TagDetail) => (
-            <span title={`by ${t.created_by}`}>{new Date(t.created_at).toLocaleDateString()}</span>
-          ),
-        },
-        {
-          key: 'actions',
-          header: '',
-          render: (t: TagDetail) => (
-            <div className="action-buttons">
-              <a
-                href={getDownloadUrl(projectName!, packageName!, t.name)}
-                className="btn btn-icon"
-                download
-                title="Download"
-              >
-                <svg width="16" height="16" viewBox="0 0 24 24" fill="none" stroke="currentColor" strokeWidth="2">
-                  <path d="M21 15v4a2 2 0 0 1-2 2H5a2 2 0 0 1-2-2v-4" />
-                  <polyline points="7 10 12 15 17 10" />
-                  <line x1="12" y1="15" x2="12" y2="3" />
-                </svg>
-              </a>
-              <button
-                className="btn btn-icon"
-                onClick={(e) => handleMenuOpen(e, t.id)}
-                title="More actions"
-              >
-                <svg width="16" height="16" viewBox="0 0 24 24" fill="none" stroke="currentColor" strokeWidth="2">
-                  <circle cx="12" cy="12" r="1" />
-                  <circle cx="12" cy="5" r="1" />
-                  <circle cx="12" cy="19" r="1" />
-                </svg>
-              </button>
-            </div>
-          ),
-        },
-      ];
-
-  // Find the tag for the open menu
-  const openMenuTag = tags.find(t => t.id === openMenuId);
-
-  // Close menu when clicking outside
-  const handleClickOutside = () => {
-    if (openMenuId) {
-      setOpenMenuId(null);
-      setMenuPosition(null);
-    }
-  };
-
-  // Render dropdown menu as a portal-like element
-  const renderActionMenu = () => {
-    if (!openMenuId || !menuPosition || !openMenuTag) return null;
-    const t = openMenuTag;
-    return (
-      <div
-        className="action-menu-backdrop"
-        onClick={handleClickOutside}
-      >
-        <div
-          className="action-menu-dropdown"
-          style={{ top: menuPosition.top, left: menuPosition.left }}
-          onClick={(e) => e.stopPropagation()}
         >
-          <button onClick={() => { setViewArtifactId(t.artifact_id); setShowArtifactIdModal(true); setOpenMenuId(null); setMenuPosition(null); }}>
+          {t.name}
-            View Artifact ID
+        </strong>
-          </button>
+      ),
-          <button onClick={() => { navigator.clipboard.writeText(t.artifact_id); setOpenMenuId(null); setMenuPosition(null); }}>
+    },
-            Copy Artifact ID
+    {
-          </button>
+      key: 'version',
-          <button onClick={() => { fetchEnsureFileForTag(t.name); setOpenMenuId(null); setMenuPosition(null); }}>
+      header: 'Version',
-            View Ensure File
+      render: (t: TagDetail) => (
-          </button>
+        <span className="version-badge">{t.version || '-'}</span>
-          {canWrite && !isSystemProject && (
+      ),
-            <button onClick={() => { setCreateTagArtifactId(t.artifact_id); setShowCreateTagModal(true); setOpenMenuId(null); setMenuPosition(null); }}>
+    },
-              Create/Update Tag
+    {
-            </button>
+      key: 'artifact_id',
-          )}
+      header: 'Artifact ID',
-          <button onClick={() => { handleTagSelect(t); setShowDepsModal(true); setOpenMenuId(null); setMenuPosition(null); }}>
+      render: (t: TagDetail) => (
-            View Dependencies
+        <div className="artifact-id-cell">
-          </button>
+          <code className="artifact-id">{t.artifact_id.substring(0, 12)}...</code>
+          <CopyButton text={t.artifact_id} />
         </div>
-      </div>
+      ),
-    );
+    },
-  };
+    {
+      key: 'artifact_size',
+      header: 'Size',
+      render: (t: TagDetail) => <span>{formatBytes(t.artifact_size)}</span>,
+    },
+    {
+      key: 'artifact_content_type',
+      header: 'Type',
+      render: (t: TagDetail) => (
+        <span className="content-type">{t.artifact_content_type || '-'}</span>
+      ),
+    },
+    {
+      key: 'artifact_original_name',
+      header: 'Filename',
+      className: 'cell-truncate',
+      render: (t: TagDetail) => (
+        <span title={t.artifact_original_name || undefined}>{t.artifact_original_name || '-'}</span>
+      ),
+    },
+    {
+      key: 'created_at',
+      header: 'Created',
+      sortable: true,
+      render: (t: TagDetail) => (
+        <div className="created-cell">
+          <span>{new Date(t.created_at).toLocaleString()}</span>
+          <span className="created-by">by {t.created_by}</span>
+        </div>
+      ),
+    },
+    {
+      key: 'actions',
+      header: 'Actions',
+      render: (t: TagDetail) => (
+        <div className="action-buttons">
+          <button
+            className="btn btn-secondary btn-small"
+            onClick={() => fetchEnsureFileForTag(t.name)}
+            title="View orchard.ensure file"
+          >
+            Ensure
+          </button>
+          <a
+            href={getDownloadUrl(projectName!, packageName!, t.name)}
+            className="btn btn-secondary btn-small"
+            download
+          >
+            Download
+          </a>
+        </div>
+      ),
+    },
+  ];
 
   if (loading && !tagsData) {
     return <div className="loading">Loading...</div>;
@@ -586,19 +451,6 @@ function PackagePage() {
           <div className="page-header__title-row">
             <h1>{packageName}</h1>
             {pkg && <Badge variant="default">{pkg.format}</Badge>}
-            {user && canWrite && !isSystemProject && (
-              <button
-                className="btn btn-primary btn-small header-upload-btn"
-                onClick={() => setShowUploadModal(true)}
-              >
-                <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" strokeWidth="2" style={{ marginRight: '6px' }}>
-                  <path d="M21 15v4a2 2 0 0 1-2 2H5a2 2 0 0 1-2-2v-4" />
-                  <polyline points="17 8 12 3 7 8" />
-                  <line x1="12" y1="3" x2="12" y2="15" />
-                </svg>
-                Upload
-              </button>
-            )}
           </div>
           {pkg?.description && <p className="description">{pkg.description}</p>}
           <div className="page-header__meta">
@@ -616,14 +468,14 @@ function PackagePage() {
           </div>
           {pkg && (pkg.tag_count !== undefined || pkg.artifact_count !== undefined) && (
             <div className="package-header-stats">
-              {!isSystemProject && pkg.tag_count !== undefined && (
+              {pkg.tag_count !== undefined && (
                 <span className="stat-item">
                   <strong>{pkg.tag_count}</strong> tags
                 </span>
               )}
               {pkg.artifact_count !== undefined && (
                 <span className="stat-item">
-                  <strong>{pkg.artifact_count}</strong> {isSystemProject ? 'versions' : 'artifacts'}
+                  <strong>{pkg.artifact_count}</strong> artifacts
                 </span>
               )}
               {pkg.total_size !== undefined && pkg.total_size > 0 && (
@@ -631,7 +483,7 @@ function PackagePage() {
                   <strong>{formatBytes(pkg.total_size)}</strong> total
                 </span>
               )}
-              {!isSystemProject && pkg.latest_tag && (
+              {pkg.latest_tag && (
                 <span className="stat-item">
                   Latest: <strong className="accent">{pkg.latest_tag}</strong>
                 </span>
@@ -644,9 +496,44 @@ function PackagePage() {
       {error && <div className="error-message">{error}</div>}
       {uploadSuccess && <div className="success-message">{uploadSuccess}</div>}
 
+      {user && (
+        <div className="upload-section card">
+          <h3>Upload Artifact</h3>
+          {canWrite ? (
+            <div className="upload-form">
+              <div className="form-group">
+                <label htmlFor="upload-tag">Tag (optional)</label>
+                <input
+                  id="upload-tag"
+                  type="text"
+                  value={uploadTag}
+                  onChange={(e) => setUploadTag(e.target.value)}
+                  placeholder="v1.0.0, latest, stable..."
+                />
+              </div>
+              <DragDropUpload
+                projectName={projectName!}
+                packageName={packageName!}
+                tag={uploadTag || undefined}
+                onUploadComplete={handleUploadComplete}
+                onUploadError={handleUploadError}
+              />
+            </div>
+          ) : (
+            <DragDropUpload
+              projectName={projectName!}
+              packageName={packageName!}
+              disabled={true}
+              disabledReason="You have read-only access to this project and cannot upload artifacts."
+              onUploadComplete={handleUploadComplete}
+              onUploadError={handleUploadError}
+            />
+          )}
+        </div>
+      )}
 
       <div className="section-header">
-        <h2>{isSystemProject ? 'Versions' : 'Tags / Versions'}</h2>
+        <h2>Tags / Versions</h2>
       </div>
 
       <div className="list-controls">
@@ -690,6 +577,110 @@ function PackagePage() {
         />
       )}
 
+      {/* Dependencies Section */}
+      {tags.length > 0 && (
+        <div className="dependencies-section card">
+          <div className="dependencies-header">
+            <h3>Dependencies</h3>
+            <div className="dependencies-controls">
+              {selectedTag && (
+                <>
+                  <button
+                    className="btn btn-secondary btn-small"
+                    onClick={fetchEnsureFile}
+                    disabled={ensureFileLoading}
+                    title="View orchard.ensure file"
+                  >
+                    <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" strokeWidth="2" style={{ marginRight: '6px' }}>
+                      <path d="M14 2H6a2 2 0 0 0-2 2v16a2 2 0 0 0 2 2h12a2 2 0 0 0 2-2V8z"></path>
+                      <polyline points="14 2 14 8 20 8"></polyline>
+                      <line x1="16" y1="13" x2="8" y2="13"></line>
+                      <line x1="16" y1="17" x2="8" y2="17"></line>
+                      <polyline points="10 9 9 9 8 9"></polyline>
+                    </svg>
+                    {ensureFileLoading ? 'Loading...' : 'View Ensure File'}
+                  </button>
+                  <button
+                    className="btn btn-secondary btn-small"
+                    onClick={() => setShowGraph(true)}
+                    title="View full dependency tree"
+                  >
+                    <svg width="14" height="14" viewBox="0 0 24 24" fill="none" stroke="currentColor" strokeWidth="2" style={{ marginRight: '6px' }}>
+                      <circle cx="12" cy="12" r="3"></circle>
+                      <circle cx="4" cy="4" r="2"></circle>
+                      <circle cx="20" cy="4" r="2"></circle>
+                      <circle cx="4" cy="20" r="2"></circle>
+                      <circle cx="20" cy="20" r="2"></circle>
+                      <line x1="9.5" y1="9.5" x2="5.5" y2="5.5"></line>
+                      <line x1="14.5" y1="9.5" x2="18.5" y2="5.5"></line>
+                      <line x1="9.5" y1="14.5" x2="5.5" y2="18.5"></line>
+                      <line x1="14.5" y1="14.5" x2="18.5" y2="18.5"></line>
+                    </svg>
+                    View Graph
+                  </button>
+                </>
+              )}
+            </div>
+          </div>
+          <div className="dependencies-tag-select">
+            {selectedTag && (
+              <select
+                className="tag-selector"
+                value={selectedTag.id}
+                onChange={(e) => {
+                  const tag = tags.find(t => t.id === e.target.value);
+                  if (tag) setSelectedTag(tag);
+                }}
+              >
+                {tags.map(t => (
+                  <option key={t.id} value={t.id}>
+                    {t.name}{t.version ? ` (${t.version})` : ''}
+                  </option>
+                ))}
+              </select>
+            )}
+          </div>
+
+          {depsLoading ? (
+            <div className="deps-loading">Loading dependencies...</div>
+          ) : depsError ? (
+            <div className="deps-error">{depsError}</div>
+          ) : dependencies.length === 0 ? (
+            <div className="deps-empty">
+              {selectedTag ? (
+                <span><strong>{selectedTag.name}</strong> has no dependencies</span>
+              ) : (
+                <span>No dependencies</span>
+              )}
+            </div>
+          ) : (
+            <div className="deps-list">
+              <div className="deps-summary">
+                <strong>{selectedTag?.name}</strong> has {dependencies.length} {dependencies.length === 1 ? 'dependency' : 'dependencies'}:
+              </div>
+              <ul className="deps-items">
+                {dependencies.map((dep) => (
+                  <li key={dep.id} className="dep-item">
+                    <Link
+                      to={`/project/${dep.project}/${dep.package}`}
+                      className="dep-link"
+                    >
+                      {dep.project}/{dep.package}
+                    </Link>
+                    <span className="dep-constraint">
+                      @ {dep.version || dep.tag}
+                    </span>
+                    <span className="dep-status dep-status--ok" title="Package exists">
+                      &#10003;
+                    </span>
+                  </li>
+                ))}
+              </ul>
+            </div>
+          )}
+        </div>
+      )}
+
       {/* Used By (Reverse Dependencies) Section */}
       <div className="used-by-section card">
         <h3>Used By</h3>
@@ -746,6 +737,78 @@ function PackagePage() {
         )}
       </div>
 
+      <div className="download-by-id-section card">
+        <h3>Download by Artifact ID</h3>
+        <div className="download-by-id-form">
+          <input
+            type="text"
+            value={artifactIdInput}
+            onChange={(e) => setArtifactIdInput(e.target.value.toLowerCase().replace(/[^a-f0-9]/g, '').slice(0, 64))}
+            placeholder="Enter SHA256 artifact ID (64 hex characters)"
+            className="artifact-id-input"
+          />
+          <a
+            href={artifactIdInput.length === 64 ? getDownloadUrl(projectName!, packageName!, `artifact:${artifactIdInput}`) : '#'}
+            className={`btn btn-primary ${artifactIdInput.length !== 64 ? 'btn-disabled' : ''}`}
+            download
+            onClick={(e) => {
+              if (artifactIdInput.length !== 64) {
+                e.preventDefault();
+              }
+            }}
+          >
+            Download
+          </a>
+        </div>
+        {artifactIdInput.length > 0 && artifactIdInput.length !== 64 && (
+          <p className="validation-hint">Artifact ID must be exactly 64 hex characters ({artifactIdInput.length}/64)</p>
+        )}
+      </div>
+
+      {user && canWrite && (
+        <div className="create-tag-section card">
+          <h3>Create / Update Tag</h3>
+          <p className="section-description">Point a tag at any existing artifact by its ID</p>
+          <form onSubmit={handleCreateTag} className="create-tag-form">
+            <div className="form-row">
+              <div className="form-group">
+                <label htmlFor="create-tag-name">Tag Name</label>
+                <input
+                  id="create-tag-name"
+                  type="text"
+                  value={createTagName}
+                  onChange={(e) => setCreateTagName(e.target.value)}
+                  placeholder="latest, stable, v1.0.0..."
+                  disabled={createTagLoading}
+                />
+              </div>
+              <div className="form-group form-group--wide">
+                <label htmlFor="create-tag-artifact">Artifact ID</label>
+                <input
+                  id="create-tag-artifact"
+                  type="text"
+                  value={createTagArtifactId}
+                  onChange={(e) => setCreateTagArtifactId(e.target.value.toLowerCase().replace(/[^a-f0-9]/g, '').slice(0, 64))}
+                  placeholder="SHA256 hash (64 hex characters)"
+                  className="artifact-id-input"
+                  disabled={createTagLoading}
+                />
+              </div>
+              <button
+                type="submit"
+                className="btn btn-primary"
+                disabled={createTagLoading || !createTagName.trim() || createTagArtifactId.length !== 64}
+              >
+                {createTagLoading ? 'Creating...' : 'Create Tag'}
+              </button>
+            </div>
+            {createTagArtifactId.length > 0 && createTagArtifactId.length !== 64 && (
+              <p className="validation-hint">Artifact ID must be exactly 64 hex characters ({createTagArtifactId.length}/64)</p>
+            )}
+          </form>
+        </div>
+      )}
+
       <div className="usage-section card">
         <h3>Usage</h3>
         <p>Download artifacts using:</p>
@@ -768,118 +831,6 @@ function PackagePage() {
         />
       )}
 
-      {/* Upload Modal */}
-      {showUploadModal && (
-        <div className="modal-overlay" onClick={() => setShowUploadModal(false)}>
-          <div className="upload-modal" onClick={(e) => e.stopPropagation()}>
-            <div className="modal-header">
-              <h3>Upload Artifact</h3>
-              <button
-                className="modal-close"
-                onClick={() => setShowUploadModal(false)}
-                title="Close"
-              >
-                <svg width="20" height="20" viewBox="0 0 24 24" fill="none" stroke="currentColor" strokeWidth="2">
-                  <line x1="18" y1="6" x2="6" y2="18"></line>
-                  <line x1="6" y1="6" x2="18" y2="18"></line>
-                </svg>
-              </button>
-            </div>
-            <div className="modal-body">
-              <div className="form-group">
-                <label htmlFor="upload-tag">Tag (optional)</label>
-                <input
-                  id="upload-tag"
-                  type="text"
-                  value={uploadTag}
-                  onChange={(e) => setUploadTag(e.target.value)}
-                  placeholder="v1.0.0, latest, stable..."
-                />
-              </div>
-              <DragDropUpload
-                projectName={projectName!}
-                packageName={packageName!}
-                tag={uploadTag || undefined}
-                onUploadComplete={(result) => {
-                  handleUploadComplete(result);
-                  setShowUploadModal(false);
-                  setUploadTag('');
-                }}
-                onUploadError={handleUploadError}
-              />
-            </div>
-          </div>
-        </div>
-      )}
-
-      {/* Create/Update Tag Modal */}
-      {showCreateTagModal && (
-        <div className="modal-overlay" onClick={() => setShowCreateTagModal(false)}>
-          <div className="create-tag-modal" onClick={(e) => e.stopPropagation()}>
-            <div className="modal-header">
-              <h3>Create / Update Tag</h3>
-              <button
-                className="modal-close"
-                onClick={() => { setShowCreateTagModal(false); setCreateTagName(''); setCreateTagArtifactId(''); }}
-                title="Close"
-              >
-                <svg width="20" height="20" viewBox="0 0 24 24" fill="none" stroke="currentColor" strokeWidth="2">
-                  <line x1="18" y1="6" x2="6" y2="18"></line>
-                  <line x1="6" y1="6" x2="18" y2="18"></line>
-                </svg>
-              </button>
-            </div>
-            <div className="modal-body">
-              <p className="modal-description">Point a tag at an artifact by its ID</p>
-              <form onSubmit={(e) => { handleCreateTag(e); setShowCreateTagModal(false); }}>
-                <div className="form-group">
-                  <label htmlFor="modal-tag-name">Tag Name</label>
-                  <input
-                    id="modal-tag-name"
-                    type="text"
-                    value={createTagName}
-                    onChange={(e) => setCreateTagName(e.target.value)}
-                    placeholder="latest, stable, v1.0.0..."
-                    disabled={createTagLoading}
-                  />
-                </div>
-                <div className="form-group">
-                  <label htmlFor="modal-artifact-id">Artifact ID</label>
-                  <input
-                    id="modal-artifact-id"
-                    type="text"
-                    value={createTagArtifactId}
-                    onChange={(e) => setCreateTagArtifactId(e.target.value.toLowerCase().replace(/[^a-f0-9]/g, '').slice(0, 64))}
-                    placeholder="SHA256 hash (64 hex characters)"
-                    className="artifact-id-input"
-                    disabled={createTagLoading}
-                  />
-                  {createTagArtifactId.length > 0 && createTagArtifactId.length !== 64 && (
-                    <p className="validation-hint">{createTagArtifactId.length}/64 characters</p>
-                  )}
-                </div>
-                <div className="modal-actions">
-                  <button
-                    type="button"
-                    className="btn btn-secondary"
-                    onClick={() => { setShowCreateTagModal(false); setCreateTagName(''); setCreateTagArtifactId(''); }}
-                  >
-                    Cancel
-                  </button>
-                  <button
-                    type="submit"
-                    className="btn btn-primary"
-                    disabled={createTagLoading || !createTagName.trim() || createTagArtifactId.length !== 64}
-                  >
-                    {createTagLoading ? 'Creating...' : 'Create Tag'}
-                  </button>
-                </div>
-              </form>
-            </div>
-          </div>
-        </div>
-      )}
-
       {/* Ensure File Modal */}
       {showEnsureFile && (
         <div className="modal-overlay" onClick={() => setShowEnsureFile(false)}>
@@ -921,107 +872,6 @@ function PackagePage() {
           </div>
         </div>
       )}
-
-      {/* Dependencies Modal */}
-      {showDepsModal && selectedTag && (
-        <div className="modal-overlay" onClick={() => setShowDepsModal(false)}>
-          <div className="deps-modal" onClick={(e) => e.stopPropagation()}>
-            <div className="modal-header">
-              <h3>Dependencies for {selectedTag.version || selectedTag.name}</h3>
-              <button
-                className="modal-close"
-                onClick={() => setShowDepsModal(false)}
-                title="Close"
-              >
-                <svg width="20" height="20" viewBox="0 0 24 24" fill="none" stroke="currentColor" strokeWidth="2">
-                  <line x1="18" y1="6" x2="6" y2="18"></line>
-                  <line x1="6" y1="6" x2="18" y2="18"></line>
-                </svg>
-              </button>
-            </div>
-            <div className="modal-body">
-              <div className="deps-modal-controls">
-                <button
-                  className="btn btn-secondary btn-small"
-                  onClick={fetchEnsureFile}
-                  disabled={ensureFileLoading}
-                >
-                  View Ensure File
-                </button>
-                <button
-                  className="btn btn-secondary btn-small"
-                  onClick={() => { setShowDepsModal(false); setShowGraph(true); }}
-                >
-                  View Graph
-                </button>
-              </div>
-              {depsLoading ? (
-                <div className="deps-loading">Loading dependencies...</div>
-              ) : depsError ? (
-                <div className="deps-error">{depsError}</div>
-              ) : dependencies.length === 0 ? (
-                <div className="deps-empty">No dependencies</div>
-              ) : (
-                <div className="deps-list">
-                  <div className="deps-summary">
-                    {dependencies.length} {dependencies.length === 1 ? 'dependency' : 'dependencies'}:
-                  </div>
-                  <ul className="deps-items">
-                    {dependencies.map((dep) => (
-                      <li key={dep.id} className="dep-item">
-                        <Link
-                          to={`/project/${dep.project}/${dep.package}`}
-                          className="dep-link"
-                          onClick={() => setShowDepsModal(false)}
-                        >
-                          {dep.project}/{dep.package}
-                        </Link>
-                        <span className="dep-constraint">
-                          @ {dep.version || dep.tag}
-                        </span>
-                        <span className="dep-status dep-status--ok" title="Package exists">
-                          &#10003;
-                        </span>
-                      </li>
-                    ))}
-                  </ul>
-                </div>
-              )}
-            </div>
-          </div>
-        </div>
-      )}
-
-      {/* Artifact ID Modal */}
-      {showArtifactIdModal && viewArtifactId && (
-        <div className="modal-overlay" onClick={() => setShowArtifactIdModal(false)}>
-          <div className="artifact-id-modal" onClick={(e) => e.stopPropagation()}>
-            <div className="modal-header">
-              <h3>Artifact ID</h3>
-              <button
-                className="modal-close"
-                onClick={() => setShowArtifactIdModal(false)}
-                title="Close"
-              >
-                <svg width="20" height="20" viewBox="0 0 24 24" fill="none" stroke="currentColor" strokeWidth="2">
-                  <line x1="18" y1="6" x2="6" y2="18"></line>
-                  <line x1="6" y1="6" x2="18" y2="18"></line>
-                </svg>
-              </button>
-            </div>
-            <div className="modal-body">
-              <p className="modal-description">SHA256 hash identifying this artifact:</p>
-              <div className="artifact-id-display">
-                <code>{viewArtifactId}</code>
-                <CopyButton text={viewArtifactId} />
-              </div>
-            </div>
-          </div>
-        </div>
-      )}
-
-      {/* Action Menu Dropdown */}
-      {renderActionMenu()}
     </div>
   );
 }

frontend/src/pages/ProjectPage.tsx

@@ -214,7 +214,7 @@ function ProjectPage() {
           </div>
         </div>
         <div className="page-header__actions">
-          {canAdmin && !project.team_id && !project.is_system && (
+          {canAdmin && !project.team_id && (
             <button
               className="btn btn-secondary"
               onClick={() => navigate(`/project/${projectName}/settings`)}
@@ -227,11 +227,11 @@ function ProjectPage() {
               Settings
             </button>
           )}
-          {canWrite && !project.is_system ? (
+          {canWrite ? (
             <button className="btn btn-primary" onClick={() => setShowForm(!showForm)}>
               {showForm ? 'Cancel' : '+ New Package'}
             </button>
-          ) : user && !project.is_system ? (
+          ) : user ? (
             <span className="text-muted" title="You have read-only access to this project">
               Read-only access
             </span>
@@ -294,20 +294,18 @@ function ProjectPage() {
           placeholder="Filter packages..."
           className="list-controls__search"
         />
-        {!project?.is_system && (
+        <select
-          <select
+          className="list-controls__select"
-            className="list-controls__select"
+          value={format}
-            value={format}
+          onChange={(e) => handleFormatChange(e.target.value)}
-            onChange={(e) => handleFormatChange(e.target.value)}
+        >
-          >
+          <option value="">All formats</option>
-            <option value="">All formats</option>
+          {FORMAT_OPTIONS.map((f) => (
-            {FORMAT_OPTIONS.map((f) => (
+            <option key={f} value={f}>
-              <option key={f} value={f}>
+              {f}
-                {f}
+            </option>
-              </option>
+          ))}
-            ))}
+        </select>
-          </select>
-        )}
       </div>
 
       {hasActiveFilters && (
@@ -343,19 +341,19 @@ function ProjectPage() {
               className: 'cell-description',
               render: (pkg) => pkg.description || '—',
             },
-            ...(!project?.is_system ? [{
+            {
               key: 'format',
               header: 'Format',
-              render: (pkg: Package) => <Badge variant="default">{pkg.format}</Badge>,
+              render: (pkg) => <Badge variant="default">{pkg.format}</Badge>,
-            }] : []),
+            },
-            ...(!project?.is_system ? [{
+            {
               key: 'tag_count',
               header: 'Tags',
-              render: (pkg: Package) => pkg.tag_count ?? '—',
+              render: (pkg) => pkg.tag_count ?? '—',
-            }] : []),
+            },
             {
               key: 'artifact_count',
-              header: project?.is_system ? 'Versions' : 'Artifacts',
+              header: 'Artifacts',
               render: (pkg) => pkg.artifact_count ?? '—',
             },
             {
@@ -364,12 +362,12 @@ function ProjectPage() {
               render: (pkg) =>
                 pkg.total_size !== undefined && pkg.total_size > 0 ? formatBytes(pkg.total_size) : '—',
             },
-            ...(!project?.is_system ? [{
+            {
               key: 'latest_tag',
               header: 'Latest',
-              render: (pkg: Package) =>
+              render: (pkg) =>
                 pkg.latest_tag ? <strong style={{ color: 'var(--accent-primary)' }}>{pkg.latest_tag}</strong> : '—',
-            }] : []),
+            },
             {
               key: 'created_at',
               header: 'Created',