Commit Graph

74 Commits

Author SHA1 Message Date
Mondo Diaz
47b137f4eb Improve Active Workers table and recover stale tasks
Backend:
- Add _recover_stale_tasks() to reset tasks stuck in 'in_progress'
  from previous crashes (tasks >5 min old get reset to pending)
- Called automatically on startup

Frontend:
- Fix dark mode colors using CSS variables instead of hardcoded values
- Add elapsed time column showing how long task has been running
- Add spinning indicator next to package name
- Add status badge (Running/Stale?)
- Highlight stale tasks (>5 min) in amber
- Auto-updates every 5 seconds with existing refresh
2026-02-02 14:29:17 -06:00
Mondo Diaz
1138309aaa Add Active Workers table to Background Jobs dashboard
Shows currently processing cache tasks in a dynamic table with:
- Package name and version constraint being cached
- Recursion depth and attempt number
- Start timestamp
- Pulsing indicator to show live activity

Backend changes:
- Add get_active_tasks() function to pypi_cache_worker.py
- Add GET /pypi/cache/active endpoint to pypi_proxy.py

Frontend changes:
- Add PyPICacheActiveTask type
- Add getPyPICacheActiveTasks() API function
- Add Active Workers section with animated table
- Auto-refreshes every 5 seconds with existing data
2026-02-02 13:50:45 -06:00
Mondo Diaz
3bdeade7ca Fix nested dependency depth tracking in PyPI cache worker
When the cache worker downloaded a package through the proxy, dependencies
were always queued with depth=0 instead of depth+1. This meant depth limits
weren't properly enforced for nested dependencies.

Changes:
- Add cache-depth query parameter to pypi_download_file endpoint
- Worker now passes its current depth when fetching packages
- Dependencies are queued at cache_depth+1 instead of hardcoded 0
- Add tests for depth tracking behavior
2026-02-02 13:47:22 -06:00
Mondo Diaz
97b39d000b Add security fixes and code cleanup for PyPI cache
- Add require_admin authentication to cache management endpoints
- Add limit validation (1-500) on failed tasks query
- Add thread lock for worker pool thread safety
- Fix exception handling with separate recovery DB session
- Remove obsolete design doc
2026-02-02 11:37:25 -06:00
Mondo Diaz
d274f3f375 Add robust PyPI dependency caching with task queue
Replace unbounded thread spawning with managed worker pool:
- New pypi_cache_tasks table tracks caching jobs
- Thread pool with 5 workers (configurable via ORCHARD_PYPI_CACHE_WORKERS)
- Automatic retries with exponential backoff (30s, 60s, then fail)
- Deduplication to prevent duplicate caching attempts

New API endpoints for visibility and control:
- GET /pypi/cache/status - queue health summary
- GET /pypi/cache/failed - list failed tasks with errors
- POST /pypi/cache/retry/{package} - retry single package
- POST /pypi/cache/retry-all - retry all failed packages

This fixes silent failures in background dependency caching where
packages would fail to cache without any tracking or retry mechanism.
2026-02-02 11:16:02 -06:00
Mondo Diaz
3c2ab70ef0 Fix proactive dependency caching HTTPS redirect issue
When background threads fetch from our own proxy using the request's
base_url, it returns http:// but ingress requires https://. The 308
redirect was dropping trailing slashes, causing requests to hit the
frontend catch-all route instead of /pypi/simple/.

Force HTTPS explicitly in the background caching function to avoid
the redirect entirely.
2026-01-30 18:59:31 -06:00
Mondo Diaz
109a593f83 Add debug logging for proactive caching regex failures 2026-01-30 18:43:09 -06:00
Mondo Diaz
1d727b3f8c Fix proactive caching regex to match both hyphens and underscores
PEP 503 normalizes package names to use hyphens, but wheel filenames
may use underscores (e.g., typing_extensions-4.0.0-py3-none-any.whl).

Convert the search pattern to match either separator.
2026-01-30 18:25:30 -06:00
Mondo Diaz
47aa0afe91 Fix proactive caching failing on HTTP->HTTPS redirects
The background dependency caching was getting 308 redirects because
request.base_url returns http:// but the ingress redirects to https://.

Enable follow_redirects=True in httpx client to handle this.
2026-01-30 18:11:08 -06:00
Mondo Diaz
f992fc540e Add proactive dependency caching for PyPI packages
When a PyPI package is cached, its dependencies are now automatically
fetched in background threads. This ensures the entire dependency tree
is cached even if pip already has some packages installed locally.

Features:
- Background threads fetch each dependency without blocking the response
- Uses our own proxy endpoint to cache, which recursively caches transitive deps
- Max depth of 10 to prevent infinite loops
- Daemon threads so they don't block process shutdown
2026-01-30 17:45:30 -06:00
Mondo Diaz
044a6c1d27 Fix duplicate dependency constraint causing 500 errors
- Deduplicate dependencies by package name before inserting
- Some packages (like anyio) list the same dep (trio) multiple times with
  different version constraints for different extras
- The unique constraint on (artifact_id, project, package) rejected these
- Also removed debug logging from dependencies.py
2026-01-30 17:43:49 -06:00
Mondo Diaz
62c77dc16d Add detailed debug logging to _resolve_dependency_to_artifact 2026-01-30 17:29:19 -06:00
Mondo Diaz
7c05360eed Add debug logging to resolve_dependencies 2026-01-30 17:21:04 -06:00
Mondo Diaz
76878279e9 Add backfill script for PyPI package dependencies
Script extracts Requires-Dist metadata from cached PyPI packages
and stores them in artifact_dependencies table.

Usage:
  docker exec <container> python -m backend.scripts.backfill_pypi_dependencies
  docker exec <container> python -m backend.scripts.backfill_pypi_dependencies --dry-run
2026-01-30 15:38:45 -06:00
Mondo Diaz
e1b01abf9b Add PEP 440 version constraint matching for dependency resolution
- Parse version constraints like >=1.9, <2.0 using packaging library
- Find the latest version that satisfies the constraint
- Support wildcard (*) to get latest version
- Fall back to exact version and tag matching
2026-01-30 15:34:19 -06:00
Mondo Diaz
47b3eb439d Extract and store dependencies from PyPI packages
- Add functions to parse Requires-Dist metadata from wheel and sdist files
- Store extracted dependencies in artifact_dependencies table
- Fix streaming response for cached artifacts (proper tuple unpacking)
- Fix version uniqueness check to use version string instead of artifact_id
- Skip creating versions for .metadata files
2026-01-30 15:14:52 -06:00
Mondo Diaz
c5f75e4fd6 Add is_system to all ProjectResponse constructions in routes 2026-01-30 13:34:26 -06:00
Mondo Diaz
ff31379649 Fix: ensure existing _pypi project gets is_system=true 2026-01-30 13:33:31 -06:00
Mondo Diaz
424b1e5770 Add is_system field to ProjectResponse schema 2026-01-30 13:11:11 -06:00
Mondo Diaz
fe6c6c52d2 Fix PyPI proxy UX and package stats calculation
- Fix artifact_count and total_size calculation to use Tags instead of
  Uploads, so PyPI cached packages show their stats correctly
- Fix PackagePage dropdown menu positioning (use fixed position with backdrop)
- Add system project detection for projects starting with "_"
- Show Version as primary column for system projects, hide Tag column
- Hide upload button for system projects (they're cache-only)
- Rename section header to "Versions" for system projects
- Fix test_projects_sort_by_name to exclude system projects from sort comparison
2026-01-30 12:16:05 -06:00
Mondo Diaz
f3afdd3bbf Improve PyPI proxy and Package page UX
PyPI proxy improvements:
- Set package format to "pypi" instead of "generic"
- Extract version from filename and create PackageVersion record
- Support .whl, .tar.gz, and .zip filename formats

Package page UX overhaul:
- Move upload to header button with modal
- Simplify table: combine Tag/Version, remove Type and Artifact ID columns
- Add row action menu (⋯) with: Copy ID, Ensure File, Create Tag, Dependencies
- Remove cluttered "Download by Artifact ID" and "Create/Update Tag" sections
- Add modals for upload and create tag actions
- Cleaner, more scannable table layout
2026-01-30 11:52:37 -06:00
Mondo Diaz
2dc7fe5a7b Fix PyPI proxy: use correct storage method and make project public
- Use storage.get_stream(s3_key) instead of non-existent get_artifact_stream()
- Make _pypi project public (is_public=True) so cached packages are visible
2026-01-30 10:59:50 -06:00
Mondo Diaz
534e4b964f Fix Project and Tag model fields in PyPI proxy
Use correct model fields:
- Project: is_public, is_system, created_by (not visibility)
- Tag: add required created_by field
2026-01-30 10:29:25 -06:00
Mondo Diaz
757e43fc34 Fix Artifact model field names in PyPI proxy
Use correct Artifact model fields:
- original_name instead of filename
- Add required created_by and s3_key fields
- Include checksum fields from storage result
2026-01-30 09:58:15 -06:00
Mondo Diaz
d78092de55 Fix PyPI proxy to use correct storage.store() method
The code was calling storage.store_artifact() which doesn't exist.
Changed to use storage.store() which handles content-addressable
storage with automatic deduplication.
2026-01-30 09:41:34 -06:00
Mondo Diaz
0fa991f536 Allow full path in PyPI upstream source URL
Users can now configure the full path including /simple in their
upstream source URL (e.g., https://example.com/api/pypi/repo/simple)
instead of having the code append /simple/ automatically.

This matches pip's --index-url format, making configuration more
intuitive and copy/paste friendly.
2026-01-30 09:24:05 -06:00
Mondo Diaz
00fb2729e4 Fix test_rewrite_relative_links assertion to expect correct URL
The test was checking for the wrong URL pattern. When urljoin resolves
../../packages/ab/cd/... relative to /api/pypi/pypi-remote/simple/requests/,
it correctly produces /api/pypi/pypi-remote/packages/ab/cd/... (not
/api/pypi/packages/...).
2026-01-30 08:51:30 -06:00
Mondo Diaz
8ae4d7a685 Improve PyPI proxy test assertions for all status codes
Tests now verify the correct response for each scenario:
- 200: HTML content-type
- 404: "not found" error message
- 503: "No PyPI upstream sources configured" error message
2026-01-29 19:35:20 -06:00
Mondo Diaz
4b887d1aad Fix PyPI proxy tests to work with or without upstream sources
- Tests now accept 200/404/503 responses since upstream sources may or
  may not be configured in the test environment
- Added upstream_base_url parameter to _rewrite_package_links test
- Added test for relative URL resolution (Artifactory-style URLs)
2026-01-29 19:34:33 -06:00
Mondo Diaz
4dc54ace8a Fix HTTPS scheme detection behind reverse proxy
When behind a reverse proxy that terminates SSL, the server sees HTTP
requests internally. Added _get_base_url() helper that respects the
X-Forwarded-Proto header to generate correct external HTTPS URLs.

This fixes links in the PyPI simple index showing http:// instead of
https:// when accessed via HTTPS through a load balancer.
2026-01-29 18:02:21 -06:00
Mondo Diaz
64bfd3902f Fix relative URL handling in PyPI proxy
Artifactory and other registries may return relative URLs in their
Simple API responses (e.g., ../../packages/...). The proxy now resolves
these to absolute URLs using urljoin() before encoding them in the
upstream parameter.

This fixes package downloads failing when the upstream registry uses
relative URLs in its package index.
2026-01-29 18:01:19 -06:00
Mondo Diaz
bdfed77cb1 Remove dead code from pypi_proxy.py
- Remove unused imports (UpstreamClient, UpstreamClientConfig,
  UpstreamHTTPError, UpstreamConnectionError, UpstreamTimeoutError)
- Simplify matched_source selection logic, removing dead conditional
  that always evaluated to True due to 'or True'
2026-01-29 16:42:53 -06:00
Mondo Diaz
140f6c926a Fix httpx.Timeout configuration in PyPI proxy
httpx.Timeout requires either a default value or all four parameters.
Changed to httpx.Timeout(default, connect=X) format.
2026-01-29 16:40:06 -06:00
Mondo Diaz
97498b2f86 Add transparent PyPI proxy and improve upstream sources UI 2026-01-29 16:12:57 -06:00
Mondo Diaz
95470b2bf6 Fix purge_seed_data type mismatch for access_permissions.user_id (#107) 2026-01-29 13:48:21 -06:00
Mondo Diaz
82f67539bd Remove public internet features and fix upstream source UI (#107) 2026-01-29 13:26:28 -06:00
Mondo Diaz
1d51c856b0 Add upstream caching infrastructure and refactor CI pipeline 2026-01-29 11:55:15 -06:00
Mondo Diaz
b147af43d2 Add rollback after failed migration to allow subsequent migrations to run 2026-01-28 15:23:51 -06:00
Mondo Diaz
0e67ebf94f Add teams migration to runtime migrations 2026-01-28 14:19:35 -06:00
Mondo Diaz
576791d19e Add multi-tenancy with Teams feature 2026-01-28 12:50:58 -06:00
Mondo Diaz
284945ba33 Use CI variable for stage admin password 2026-01-27 15:44:34 -06:00
Mondo Diaz
7120cf64f1 Add configurable admin password via environment variable 2026-01-27 14:23:40 -06:00
Mondo Diaz
abba90ebac Add package dependencies system and project settings page 2026-01-27 10:11:04 -06:00
Mondo Diaz
1ac75e1017 Fix factory reset and improve reset_stage CI job
- Add create_default_admin() call to factory reset (admin user wasn't being
  created after reset, only on server restart)
- Add retry logic to reset_stage CI job (3 attempts with 5s delay)
- Use proper context manager for httpx client
- Increase timeout to 120s for reset operation
- Add retry: 1 at job level for transient failures
2026-01-21 23:20:48 +00:00
Mondo Diaz
693613f111 Fix factory reset - capture username before dropping tables 2026-01-21 23:18:29 +00:00
Mondo Diaz
7ffdc64364 Fix seed_database call in factory reset - pass fresh db session 2026-01-21 22:51:03 +00:00
Mondo Diaz
535280a783 Add factory reset endpoint for stage environment cleanup (#54) 2026-01-21 16:00:02 -06:00
Mondo Diaz
fedbd95cf4 Fix S3 client to support IRSA credentials (#54) 2026-01-21 13:42:53 -07:00
Mondo Diaz
584acd1e90 Add comprehensive upload/download tests and streaming enhancements (#38, #40, #42, #43) 2026-01-21 09:35:12 -06:00
Mondo Diaz
b93d5a9c68 Add separate version tracking for artifacts 2026-01-16 11:36:08 -06:00